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We study the problem of estimating the edit distance between two $n$-character strings. While exact computation in the worst case is believed to require near-quadratic time, previous work showed that in certain regimes it is possible to…

Data Structures and Algorithms · Computer Science 2020-07-29 Joshua Brakensiek , Moses Charikar , Aviad Rubinstein

We present a near linear time algorithm for constructing hierarchical nets in finite metric spaces with constant doubling dimension. This data-structure is then applied to obtain improved algorithms for the following problems: Approximate…

Data Structures and Algorithms · Computer Science 2007-05-23 Sariel Har-Peled , Manor Mendel

We describe fully retroactive dynamic data structures for approximate range reporting and approximate nearest neighbor reporting. We show how to maintain, for any positive constant $d$, a set of $n$ points in $\R^d$ indexed by time such…

Computational Geometry · Computer Science 2011-09-05 Michael T. Goodrich , Joseph A. Simons

Let $S$ be a string of length $n$ over an alphabet $\Sigma$ and let $Q$ be a subset of $\Sigma$ of size $q \geq 2$. The 'co-occurrence problem' is to construct a compact data structure that supports the following query: given an integer $w$…

Data Structures and Algorithms · Computer Science 2022-11-11 Philip Bille , Inge Li Gørtz , Tord Stordalen

The area of sublinear algorithms have recently received a lot of attention. In this setting, one has to choose specific access model for the input, as the algorithm does not have time to pre-process or even to see the whole input. A…

Data Structures and Algorithms · Computer Science 2020-09-24 Jakub Tětek

We study the point location problem in incremental (possibly disconnected) planar subdivisions, that is, dynamic subdivisions allowing insertions of edges and vertices only. Specifically, we present an $O(n\log n)$-space data structure for…

Computational Geometry · Computer Science 2018-09-28 Eunjin Oh

Palindromes are strings that read the same forward and backward. The computation of palindromic structures within strings is a fundamental problem in string algorithms, being motivated by potential applications in formal language theory and…

Data Structures and Algorithms · Computer Science 2026-05-15 Takuya Mieno , Tomohiro I

Neighborhood graphs are gaining popularity as a concise data representation in machine learning. However, naive graph construction by pairwise distance calculation takes $O(n^2)$ runtime for $n$ data points and this is prohibitively slow…

Data Structures and Algorithms · Computer Science 2009-04-22 Takeaki Uno , Masashi Sugiyama , Koji Tsuda

Nearest neighbor (NN) problem is an important scientific problem. The NN query, to find the closest one to a given query point among a set of points, is widely used in applications such as density estimation, pattern classification,…

Databases · Computer Science 2019-11-11 Yang Li , Gang Liu , Junbin Gao , Zhenwen He , Mingyuan Bai , Chengjun Li

Given two strings $S$ and $P$, the Episode Matching problem is to find the shortest substring of $S$ that contains $P$ as a subsequence. The best known upper bound for this problem is $\tilde O(nm)$ by Das et al. (1997) , where $n,m$ are…

Data Structures and Algorithms · Computer Science 2024-02-15 Philip Bille , Inge Li Gørtz , Shay Mozes , Teresa Anna Steiner , Oren Weimann

Given an undirected unweighted graph $G$ and a source set $S$ of $|S| = \sigma $ sources, we want to build a data structure which can process the following query {\sc Q}$(s,t,e):$ find the shortest distance from $s$ to $t$ avoiding an edge…

Data Structures and Algorithms · Computer Science 2018-05-02 Manoj Gupta , Aditi Singh

We study the complexity of approximate representation and learning of submodular functions over the uniform distribution on the Boolean hypercube $\{0,1\}^n$. Our main result is the following structural theorem: any submodular function is…

Machine Learning · Computer Science 2013-04-03 Vitaly Feldman , Pravesh Kothari , Jan Vondrak

We present a new algorithm that produces a well-spaced superset of points conforming to a given input set in any dimension with guaranteed optimal output size. We also provide an approximate Delaunay graph on the output points. Our…

Computational Geometry · Computer Science 2013-04-03 Gary L. Miller , Donald R. Sheehy , Ameya Velingker

We study the Nearest Neighbor Search (NNS) problem in a high-dimensional setting where data lies in a low-dimensional subspace and is corrupted by Gaussian noise. Specifically, we consider a semi-random model in which $n$ points from an…

Data Structures and Algorithms · Computer Science 2026-04-07 Ravindran Kannan , Kijun Shin , David Woodruff

We study the complexity of geometric problems on spaces of low fractal dimension. It was recently shown by [Sidiropoulos & Sridhar, SoCG 2017] that several problems admit improved solutions when the input is a pointset in Euclidean space…

Computational Complexity · Computer Science 2017-12-14 Anastasios Sidiropoulos , Kritika Singhal , Vijay Sridhar

We study streaming algorithms for the fundamental geometric problem of computing the cost of the Euclidean Minimum Spanning Tree (MST) on an $n$-point set $X \subset \mathbb{R}^d$. In the streaming model, the points in $X$ can be added and…

Data Structures and Algorithms · Computer Science 2022-12-14 Vincent Cohen-Addad , Xi Chen , Rajesh Jayaram , Amit Levi , Erik Waingarten

In the Random Subset Sum Problem, given $n$ i.i.d. random variables $X_1, ..., X_n$, we wish to approximate any point $z \in [-1,1]$ as the sum of a suitable subset $X_{i_1(z)}, ..., X_{i_s(z)}$ of them, up to error $\varepsilon$. Despite…

Neural and Evolutionary Computing · Computer Science 2022-11-18 Luca Becchetti , Arthur Carvalho Walraven da Cunha , Andrea Clementi , Francesco d'Amore , Hicham Lesfari , Emanuele Natale , Luca Trevisan

We revisit a fundamental problem in string matching: given a pattern of length m and a text of length n, both over an alphabet of size $\sigma$, compute the Hamming distance between the pattern and the text at every location. Several…

Data Structures and Algorithms · Computer Science 2020-01-03 Timothy M. Chan , Shay Golan , Tomasz Kociumaka , Tsvi Kopelowitz , Ely Porat

Given an integer array $A[1..n]$, the Range Minimum Query problem (RMQ) asks to preprocess $A$ into a data structure, supporting RMQ queries: given $a,b\in [1,n]$, return the index $i\in[a,b]$ that minimizes $A[i]$, i.e.,…

Data Structures and Algorithms · Computer Science 2021-11-05 Mingmou Liu , Huacheng Yu

$k$-Clustering in $\mathbb{R}^d$ (e.g., $k$-median and $k$-means) is a fundamental machine learning problem. While near-linear time approximation algorithms were known in the classical setting for a dataset with cardinality $n$, it remains…

Quantum Physics · Physics 2023-06-06 Yecheng Xue , Xiaoyu Chen , Tongyang Li , Shaofeng H. -C. Jiang
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