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In statistical mechanical investigations on complex networks, it is useful to employ random graphs ensembles as null models, to compare with experimental realizations. Motivated by transcription networks, we present here a simple way to…

Statistical Mechanics · Physics 2009-11-11 F. Bassetti , M. Cosentino Lagomarsino , B. Bassetti , P. Jona

In this work, we propose to train a graph neural network via resampling from a graphon estimate obtained from the underlying network data. More specifically, the graphon or the link probability matrix of the underlying network is first…

Machine Learning · Computer Science 2021-09-07 Ziqing Hu , Yihao Fang , Lizhen Lin

Generating graphs from a target distribution is a significant challenge across many domains, including drug discovery and social network analysis. In this work, we introduce a novel graph generation method leveraging $K^2$-tree…

Machine Learning · Computer Science 2024-03-27 Yunhui Jang , Dongwoo Kim , Sungsoo Ahn

Graph Neural networks (GNNs) have recently become a powerful technique for many graph-related tasks including graph classification. Current GNN models apply different graph pooling methods that reduce the number of nodes and edges to learn…

Machine Learning · Computer Science 2023-03-08 Muhammad Ifte Khairul Islam , Max Khanov , Esra Akbas

This work deals with the generation of theoretical correlation matrices with specific sparsity patterns, associated to graph structures. We present a novel approach based on convex optimization, offering greater flexibility compared to…

Signal Processing · Electrical Eng. & Systems 2025-02-26 Ali Fakhar , Kévin Polisano , Irène Gannaz , Sophie Achard

The assortative behavior of a network is the tendency of similar (or dissimilar) nodes to connect to each other. This tendency can have an influence on various properties of the network, such as its robustness or the dynamics of spreading…

Social and Information Networks · Computer Science 2025-08-07 Marc Kaufmann , Ulysse Schaller , Thomas Bläsius , Johannes Lengler

With the development of graph applications, generative models for graphs have been more crucial. Classically, stochastic models that generate graphs with a pre-defined probability of edges and nodes have been studied. Recently, some models…

Machine Learning · Computer Science 2023-04-07 Shohei Nakazawa , Yoshiki Sato , Kenji Nakagawa , Sho Tsugawa , Kohei Watabe

Random graphs are more and more used for modeling real world networks such as evolutionary networks of proteins. For this purpose we look at two different models and analyze how properties like connectedness and degree distributions are…

Probability · Mathematics 2019-02-05 Klemens Taglieber , Uta Freiberg

Deep learning-based robotic grasping has made significant progress thanks to algorithmic improvements and increased data availability. However, state-of-the-art models are often trained on as few as hundreds or thousands of unique object…

We introduce the Graph Mixture Density Networks, a new family of machine learning models that can fit multimodal output distributions conditioned on graphs of arbitrary topology. By combining ideas from mixture models and graph…

Machine Learning · Computer Science 2021-06-28 Federico Errica , Davide Bacciu , Alessio Micheli

Specify a randomized algorithm that, given a very large graph or network, extracts a random subgraph. What can we learn about the input graph from a single subsample? We derive laws of large numbers for the sampler output, by relating…

Statistics Theory · Mathematics 2017-10-13 Peter Orbanz

The goal of graph representation learning is to embed each vertex in a graph into a low-dimensional vector space. Existing graph representation learning methods can be classified into two categories: generative models that learn the…

Machine Learning · Computer Science 2017-11-23 Hongwei Wang , Jia Wang , Jialin Wang , Miao Zhao , Weinan Zhang , Fuzheng Zhang , Xing Xie , Minyi Guo

Hierarchical structure and repetition are prevalent in graphs originating from nature or engineering. These patterns can be represented by a class of parametric-structure graphs, which are defined by templates that generate structure by way…

Data Structures and Algorithms · Computer Science 2020-11-16 Tal Ben-Nun , Lukas Gianinazzi , Torsten Hoefler , Yishai Oltchik

Generative graph models create instances of graphs that mimic the properties of real-world networks. Generative models are successful at retaining pairwise associations in the underlying networks but often fail to capture higher-order…

Social and Information Networks · Computer Science 2019-11-14 Anuththari Gamage , Eli Chien , Jianhao Peng , Olgica Milenkovic

Complex systems, ranging from soft materials to wireless communication, are often organised as random geometric networks in which nodes and edges evenly fill up the volume of some space. Studying such networks is difficult because they…

Probability · Mathematics 2022-07-19 Ivan Kryven , Rik Versendaal

Generating novel graph structures that optimize given objectives while obeying some given underlying rules is fundamental for chemistry, biology and social science research. This is especially important in the task of molecular graph…

Machine Learning · Computer Science 2019-02-26 Jiaxuan You , Bowen Liu , Rex Ying , Vijay Pande , Jure Leskovec

Generative adversarial network (GAN) is widely used for generalized and robust learning on graph data. However, for non-Euclidean graph data, the existing GAN-based graph representation methods generate negative samples by random walk or…

Machine Learning · Computer Science 2022-03-04 Jianxin Li , Xingcheng Fu , Qingyun Sun , Cheng Ji , Jiajun Tan , Jia Wu , Hao Peng

The geometry of generative models serves as the basis for interpolation, model inspection, and more. Unfortunately, most generative models lack a principal notion of geometry without restrictive assumptions on either the model or the data…

Machine Learning · Computer Science 2026-01-30 Frederik Möbius Rygaard , Shen Zhu , Yinzhu Jin , Søren Hauberg , Tom Fletcher

We generate new mathematical tools with which to quantify the macroscopic topological structure of large directed networks. This is achieved via a statistical mechanical analysis of constrained maximum entropy ensembles of directed random…

Quantitative Methods · Quantitative Biology 2015-05-27 E. S. Roberts , A. C. C. Coolen , T. Schlitt

We introduce a class of generative network models that insert edges by connecting the starting and terminal vertices of a random walk on the network graph. Within the taxonomy of statistical network models, this class is distinguished by…

Methodology · Statistics 2018-07-11 Benjamin Bloem-Reddy , Peter Orbanz