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The use of drug combinations often leads to polypharmacy side effects (POSE). A recent method formulates POSE prediction as a link prediction problem on a graph of drugs and proteins, and solves it with Graph Convolutional Networks (GCNs).…

Machine Learning · Computer Science 2020-01-29 Hao Xu , Shengqi Sang , Haiping Lu

We propose a conditional positional encoding (CPE) scheme for vision Transformers. Unlike previous fixed or learnable positional encodings, which are pre-defined and independent of input tokens, CPE is dynamically generated and conditioned…

Computer Vision and Pattern Recognition · Computer Science 2023-02-14 Xiangxiang Chu , Zhi Tian , Bo Zhang , Xinlong Wang , Chunhua Shen

Multi-label chest X-ray (CXR) recognition involves simultaneously diagnosing and identifying multiple labels for different pathologies. Since pathological labels have rich information about their relationship to each other, modeling the…

Computer Vision and Pattern Recognition · Computer Science 2023-02-23 Guoli Wang , Pingping Wang , Jinyu Cong , Kunmeng Liu , Benzheng Wei

This study addresses the challenges of symptom evolution complexity and insufficient temporal dependency modeling in Parkinson's disease progression prediction. It proposes a unified prediction framework that integrates structural…

Machine Learning · Computer Science 2025-08-22 Jiacheng Hu , Bo Zhang , Ting Xu , Haifeng Yang , Min Gao

Multi-hop knowledge graph (KG) reasoning has been widely studied in recent years to provide interpretable predictions on missing links with evidential paths. Most previous works use reinforcement learning (RL) based methods that learn to…

Computation and Language · Computer Science 2022-11-01 Yushi Bai , Xin Lv , Juanzi Li , Lei Hou , Yincen Qu , Zelin Dai , Feiyu Xiong

Graph neural networks (GNNs) have shown advantages in graph-based analysis tasks. However, most existing methods have the homogeneity assumption and show poor performance on heterophilic graphs, where the linked nodes have dissimilar…

Machine Learning · Computer Science 2024-04-16 Tianhao Peng , Wenjun Wu , Haitao Yuan , Zhifeng Bao , Zhao Pengrui , Xin Yu , Xuetao Lin , Yu Liang , Yanjun Pu

Skeleton-based action recognition aims to recognize human actions given human joint coordinates with skeletal interconnections. By defining a graph with joints as vertices and their natural connections as edges, previous works successfully…

Computer Vision and Pattern Recognition · Computer Science 2023-03-23 Yuxuan Zhou , Zhi-Qi Cheng , Chao Li , Yanwen Fang , Yifeng Geng , Xuansong Xie , Margret Keuper

Event analysis from news and social networks is very useful for a wide range of social studies and real-world applications. Recently, event graphs have been explored to model event datasets and their complex relationships, where events are…

Machine Learning · Computer Science 2022-01-04 Joao Pedro Rodrigues Mattos , Ricardo M. Marcacini

Graph embedding is gaining its popularity for link prediction in complex networks and achieving excellent performance. However, limited work has been done in sparse networks that represent most of real networks. In this paper, we propose a…

Social and Information Networks · Computer Science 2021-04-22 Min-Ren Chen , Ping Huang , Yu Lin , Shi-Min Cai

Traffic prediction is essential for intelligent transportation systems and urban computing. It aims to establish a relationship between historical traffic data X and future traffic states Y by employing various statistical or deep learning…

Artificial Intelligence · Computer Science 2025-01-14 Jiahao Ji , Wentao Zhang , Jingyuan Wang , Chao Huang

Large-scale crop type classification is a task at the core of remote sensing efforts with applications of both economic and ecological importance. Current state-of-the-art deep learning methods are based on self-attention and use satellite…

Computer Vision and Pattern Recognition · Computer Science 2022-06-15 Joachim Nyborg , Charlotte Pelletier , Ira Assent

Transformers have demonstrated success in graph learning, particularly for node-level tasks. However, existing methods encounter an information bottleneck when generating graph-level representations. The prevalent single token paradigm…

Machine Learning · Computer Science 2026-02-11 Ruixiang Wang , Yuyang Hong , Shiming Xiang , Chunhong Pan

Positional encoding plays a crucial role in transformers, significantly impacting model performance and length generalization. Prior research has introduced absolute positional encoding (APE) and relative positional encoding (RPE) to…

Computation and Language · Computer Science 2024-11-06 Chuanyang Zheng , Yihang Gao , Han Shi , Minbin Huang , Jingyao Li , Jing Xiong , Xiaozhe Ren , Michael Ng , Xin Jiang , Zhenguo Li , Yu Li

Online continuous action recognition has emerged as a critical research area due to its practical implications in real-world applications, such as human-computer interaction, healthcare, and robotics. Among various modalities,…

Computer Vision and Pattern Recognition · Computer Science 2025-02-24 Rim Slama , Wael Rabah , Hazem Wannous

Dynamic graph representation learning is a task to learn node embeddings over dynamic networks, and has many important applications, including knowledge graphs, citation networks to social networks. Graphs of this type are usually…

Social and Information Networks · Computer Science 2021-06-04 Xingzhi Guo , Baojian Zhou , Steven Skiena

This study introduces a pioneering Dynamic Hypergraph Networks (DHCE) model designed to predict future medical diagnoses from electronic health records with enhanced accuracy. The DHCE model innovates by identifying and differentiating…

Machine Learning · Computer Science 2025-01-07 Wangying Yang , Zitao Zheng , Zhizhong Wu , Bo Zhang , Yuanfang Yang

The increasing scale of graph datasets has significantly improved the performance of graph representation learning methods, but it has also introduced substantial training challenges. Graph dataset condensation techniques have emerged to…

Machine Learning · Computer Science 2026-05-28 Huaming Du , Yijie Huang , Su Yao , Yiying Wang , Yueyang Zhou , Jingwen Yang , Jinshi Zhang , Han Ji , Yu Zhao , Guisong Liu , Hegui Zhang , Carl Yang , Gang Kou

Predicting pedestrian motion trajectories is crucial for path planning and motion control of autonomous vehicles. Accurately forecasting crowd trajectories is challenging due to the uncertain nature of human motions in different…

Computer Vision and Pattern Recognition · Computer Science 2024-01-11 Yu Liu , Yuexin Zhang , Kunming Li , Yongliang Qiao , Stewart Worrall , You-Fu Li , He Kong

Knowledge graph embedding aims to learn distributed representations for entities and relations, and is proven to be effective in many applications. Crossover interactions --- bi-directional effects between entities and relations --- help…

Artificial Intelligence · Computer Science 2019-03-13 Wen Zhang , Bibek Paudel , Wei Zhang , Abraham Bernstein , Huajun Chen

Dynamic graph embedding has emerged as a very effective technique for addressing diverse temporal graph analytic tasks (i.e., link prediction, node classification, recommender systems, anomaly detection, and graph generation) in various…

Machine Learning · Computer Science 2023-12-27 Alan John Varghese , Aniruddha Bora , Mengjia Xu , George Em Karniadakis
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