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The use of fully or partially absorbing boundary conditions for diffusion-based problems has become paradigmatic in physical chemistry and biochemistry to describe reactions occurring in solutions or in living media. However, as chemical…

Statistical Mechanics · Physics 2022-12-13 Francesco Piazza

We introduce the problem of transporting vector-valued distributions. In this, a salient feature is that mass may flow between vectorial entries as well as across space (discrete or continuous). The theory relies on a first step taken to…

Optimization and Control · Mathematics 2017-05-19 Yongxin Chen , Tryphon T. Georgiou , Allen Tannenbaum

Diffusion of chemicals or tracer molecules through complex systems containing irregularly shaped channels is important in many applications. Most theoretical studies based on the famed Fick-Jacobs equation focus on the idealised case of…

Statistical Mechanics · Physics 2014-12-24 Max Bauer , Aljaz Godec , Ralf Metzler

We recover the so-called field-road diffusion model as the hydrodynamic limit of an interacting particle system. The former consists of two parabolic PDEs posed on two sets of different dimensions (a "field" and a "road" in a population…

Analysis of PDEs · Mathematics 2024-06-21 Matthieu Alfaro , Mustapha Mourragui , Samuel Tréton

We develop a semi-analytic deterministic framework for charged-particle transport with continuous slowing-down in energy and angular scattering. Directed transport and energy advection are treated by method-of-characteristics integration,…

Numerical Analysis · Mathematics 2026-02-10 Ben S. Ashby , Alex Lukyanov , Tristan Pryer

This paper develops a comprehensive Hamilton-Jacobi framework to analyze asymptotic propagation dynamics in a field-road system featuring unidirectional advection and Wentzell-type boundary conditions. We rigorously derive a Hamilton-Jacobi…

Analysis of PDEs · Mathematics 2025-11-27 Xinye Xiao , Haomin Huang

Diffusion of a two component fluid is studied in the framework of differential equations, but where these equations are systematically derived from a well-defined microscopic model. The model has a finite carrying capacity imposed upon it…

Statistical Mechanics · Physics 2015-06-04 D. Fanelli , A. J. McKane , G. Pompili , B. Tiribilli , M. Vassalli , T. Biancalani

In this paper, we consider multipoint flux mixed finite element discretizations for slightly compressible Darcy flow in porous media. The methods are formulated on general meshes composed of triangles, quadrilaterals, tetrahedra or…

Numerical Analysis · Mathematics 2018-11-07 Andrés Arrarás , Laura Portero

We consider a one-dimensional aggregation-diffusion equation, which is the gradient flow in the Wasserstein space of a functional with competing attractive-repulsive interactions. We prove that the fully deterministic particle…

Analysis of PDEs · Mathematics 2021-01-01 Sara Daneri , Emanuela Radici , Eris Runa

The Quantum Lattice Boltzmann Method (QLBM) has emerged as one of the most promising quantum computing approaches for the numerical simulation of problems in computational fluid dynamics (CFD). The dynamics is formulated in terms of…

Given a smooth Riemannian manifold $(M,g)$, compact and without boundary, we analyze the dynamical optimal mass transport problem where the cost is given by the sum of the kinetic energy and the relative entropy with respect to a reference…

Analysis of PDEs · Mathematics 2024-01-05 Gabriele Bocchi , Alessio Porretta

A fundamental problem in plasma physics, space science, and astrophysics is the transport of energetic particles interacting with stochastic magnetic fields. In particular the motion of particles across a large scale magnetic field is…

Space Physics · Physics 2015-08-26 Andreas Shalchi

We prove the existence of weak solutions to a system of two diffusion equations that are coupled by a pointwise volume constraint. The time evolution is given by gradient dynamics for a free energy functional. Our primary example is a model…

Analysis of PDEs · Mathematics 2020-03-18 Clément Cancès , Daniel Matthes

We study Fokker--Planck equations with symmetric, positive definite mobility matrices capturing diffusion in heterogeneous environments. A weighted Wasserstein metric is introduced for which these equations are gradient flows. This metric…

Optimization and Control · Mathematics 2025-05-19 Hailiang Liu , Athanasios E. Tzavaras

This paper develops the a priori analysis of a mixed finite element method for the filtration of an incompressible fluid through a non-deformable saturated porous medium with heterogeneous permeability. Flows are governed by the…

Numerical Analysis · Mathematics 2023-01-25 Sergio Caucao , Marco Discacciati

Exploiting a fluid dynamic formulation for which a probabilistic counterpart might not be available, we extend the theory of Schroedinger bridges to the case of inertial particles with losses and general, possibly singular diffusion…

Mathematical Physics · Physics 2014-10-08 Yongxin Chen , Tryphon T. Georgiou , Michele Pavon

The totally asymmetric simple exclusion process (TASEP) is a well studied example of far-from-equilibrium dynamics. Here, we consider a TASEP with open boundaries but impose a global constraint on the total number of particles. In other…

Statistical Mechanics · Physics 2008-07-02 D. A. Adams , B. Schmittmann , R. K. P. Zia

We show the application of an optimal transportation approach to estimate stochastic volatility process by using the flow that optimally transports the set of particles from the prior to a posterior distribution. We also show how to direct…

Numerical Analysis · Mathematics 2017-09-06 Raphael Douady , Shohruh Miryusupov

Rectified transport of active ellipsoidal particles is numerically investigated in a two-dimensional asymmetric potential. The out-of-equilibrium condition for the active particle is an intrinsic property, which can break thermodynamical…

Soft Condensed Matter · Physics 2015-05-12 Bao-quan Ai , Jian-chun Wu

Examples of fluid flows driven by undulating boundaries are found in nature across many different length scales. Even though different driving mechanisms have evolved in distinct environments, they perform essentially the same function:…