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We generalise various theorems for finding indiscernible trees and arrays to positive logic: based on an existing modelling theorem for s-trees, we prove modelling theorems for str-trees, str$_0$-trees (the reduct of str-trees that forgets…

Logic · Mathematics 2024-05-17 Mark Kamsma

The relationship between two important problems in tree pattern matching, the largest common subtree and the smallest common supertree problems, is established by means of simple constructions, which allow one to obtain a largest common…

Data Structures and Algorithms · Computer Science 2007-05-23 Francesc Rossello , Gabriel Valiente

We explore the relationship between polynomial functors and (rooted) trees. In the first part we use polynomial functors to derive a new convenient formalism for trees, and obtain a natural and conceptual construction of the category…

Category Theory · Mathematics 2014-07-15 Joachim Kock

Tree-decompositions and treewidth are of fundamental importance in structural and algorithmic graph theory. The "spread" of a tree-decomposition is the minimum integer $s$ such that every vertex lies in at most $s$ bags. A…

Combinatorics · Mathematics 2026-04-08 Marc Distel , Neel Kaul , Raj Kaul , David R. Wood

The notion of transducer integer sequences is considered through a series of examples. By definition, transducer integer sequences are integer sequences produced, under a suitable interpretation, by finite automata encoding tree morphisms…

Combinatorics · Mathematics 2007-05-23 Zoran Sunic

This paper outlines a method to determine whether two label-regular directed trees, are isomorphic and when they are almost isomorphic. The approach involves reinterpreting label-regular directed trees as universal covers of rooted graphs.…

Combinatorics · Mathematics 2023-03-13 Roman Gorazd

A chief problem in phylogenetics and database theory is the computation of a maximum consistent tree from a set of rooted or unrooted trees. A standard input are triplets, rooted binary trees on three leaves, or quartets, unrooted binary…

Discrete Mathematics · Computer Science 2010-05-31 Leo van Iersel , Matthias Mnich

Treemaps are a popular technique to visualize hierarchical data. The input is a weighted tree $\tree$ where the weight of each node is the sum of the weights of its children. A treemap for $\tree$ is a hierarchical partition of a rectangle…

Computational Geometry · Computer Science 2015-03-17 Mark de Berg , Bettina Speckmann , Vincent van der Weele

We consider a specific class of tree structures that can represent basic structures in linguistics and computer science such as XML documents, parse trees, and treebanks, namely, finite node-labeled sibling-ordered trees. We present…

Logic in Computer Science · Computer Science 2015-07-01 Amélie Gheerbrant , Balder ten Cate

The modular decomposition of a graph $G$ is a natural construction to capture key features of $G$ in terms of a labeled tree $(T,t)$ whose vertices are labeled as "series" ($1$), "parallel" ($0$) or "prime". However, full information of $G$…

Combinatorics · Mathematics 2022-06-16 Marc Hellmuth , Guillaume E. Scholz

We consider here the problem of chaining seeds in ordered trees. Seeds are mappings between two trees Q and T and a chain is a subset of non overlapping seeds that is consistent with respect to postfix order and ancestrality. This problem…

Quantitative Methods · Quantitative Biology 2015-05-19 Julien Allali , Cédric Chauve , Pascal Ferraro , Anne-Laure Gaillard

For a graph $G = (V, E)$, the $\gamma$-graph of $G$, denoted $G(\gamma) = (V(\gamma), E(\gamma))$, is the graph whose vertex set is the collection of minimum dominating sets, or $\gamma$-sets of $G$, and two $\gamma$-sets are adjacent in…

Combinatorics · Mathematics 2019-07-31 Stephen Finbow , Christopher M. van Bommel

The theory of Hubbard trees provides an effective classification of non-linear post-critically finite polynomial maps from \C to itself. This note will extend this classification to the case of maps from a finite union of copies of \C to…

Dynamical Systems · Mathematics 2009-09-25 Alfredo Poirier

We here explore a ``fully'' lexicalized Tree-Adjoining Grammar for discourse that takes the basic elements of a (monologic) discourse to be not simply clauses, but larger structures that are anchored on variously realized discourse cues.…

cmp-lg · Computer Science 2007-05-23 Bonnie Lynn Webber , Aravind K. Joshi

LRM-Trees are an elegant way to partition a sequence of values into sorted consecutive blocks, and to express the relative position of the first element of each block within a previous block. They were used to encode ordinal trees and to…

Data Structures and Algorithms · Computer Science 2010-09-30 Jérémy Barbay , Johannes Fischer

We study several enumeration problems connected to linear trees, a broad class which includes stars, paths, generalized stars, and caterpillars. We provide generating functions for counting the number of linear trees on $n$ vertices,…

Combinatorics · Mathematics 2020-03-23 Tanay Wakhare , Eric Wityk , Charles R. Johnson

Determining whether two graphs are isomorphic is an important and difficult problem in graph theory. One way to make progress towards this problem is by finding and studying graph invariants that distinguish large classes of graphs. Stanley…

Combinatorics · Mathematics 2020-10-22 Jeremy Zhou

We show that reconstructing a tree from order information on triples is NP-hard. This is in contrast to the case for ultra-metrics and for subtree information on quadruples which are both known to allow polynomial time reconstruction.

Combinatorics · Mathematics 2007-05-23 Eric Babson

A congruence of the weak order is simple if its quotientope is a simple polytope. We provide an alternative elementary proof of the characterization of the simple congruences in terms of forbidden up and down arcs. For this, we provide a…

Combinatorics · Mathematics 2026-05-07 Emily Barnard , Jean-Christophe Novelli , Vincent Pilaud

This paper presents a clustering algorithm that is an extension of the Category Trees algorithm. Category Trees is a clustering method that creates tree structures that branch on category type and not feature. The development in this paper…

Machine Learning · Computer Science 2021-04-23 Kieran Greer