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We propose a model-based clustering algorithm for a general class of functional data for which the components could be curves or images. The random functional data realizations could be measured with error at discrete, and possibly random,…
Mobiles are a particular class of decorated plane trees which serve as codings for planar maps. Here we address the question of enumerating mobiles in their most general flavor, in correspondence with planar Eulerian (i.e., bicolored) maps.…
Construction of phylogenetic trees and networks for extant species from their characters represents one of the key problems in phylogenomics. While solution to this problem is not always uniquely defined and there exist multiple methods for…
In this note we consider ternary trees naturally embedded in the plane in a deterministic way such that the root has position zero, or in other words label zero, and the children of a node with position $j$ have positions $j-1$, $j$, and…
We suggest a new non-recursive algorithm for constructing a binary search tree given an array of numbers. The algorithm has $O(N)$ time and $O(1)$ memory complexity if the given array of $N$ numbers is sorted. The resulting tree is of…
Since the 90's, several authors have studied a probability distribution on the set of Boolean functions on $n$ variables induced by some probability distributions on formulas built upon the connectors $And$ and $Or$ and the literals…
Rooted phylogenetic networks allow biologists to represent evolutionary relationships between present-day species by revealing ancestral speciation and hybridization events. A convenient and well-studied class of such networks are…
Any Boolean function corresponds with a complete full binary decision tree. This tree can in turn be represented in a maximally compact form as a direct acyclic graph where common subtrees are factored and shared, keeping only one copy of…
We present a new definition of non-ambiguous trees (NATs) as labelled binary trees. We thus get a differential equation whose solution can be described combinatorially. This yield a new formula for the number of NATs. We also obtain…
Regular tree grammars and regular path expressions constitute core constructs widely used in programming languages and type systems. Nevertheless, there has been little research so far on frameworks for reasoning about path expressions…
An elimination tree for a connected graph $G$ is a rooted tree on the vertices of $G$ obtained by choosing a root $x$ and recursing on the connected components of $G-x$ to produce the subtrees of $x$. Elimination trees appear in many guises…
Quasi-trees generalize trees in that the unique "path" between two nodes may be infinite and have any countable order type. They are used to define the rank-width of a countable graph in such a way that it is equal to the least upper-bound…
Tree-like tableaux are objects in bijection with alternative or permutation tableaux. They have been the subject of a fruitful combinatorial study for the past few years. In the present work, we define and study a new subclass of tree-like…
We introduce an algorithmic approach based on generating tree method for enumerating the inversion sequences with various pattern-avoidance restrictions. For a given set of patterns, we propose an algorithm that outputs either an accurate…
We prove a new formula for the generating function of multitype Cayley trees counted according to their degree distribution. Using this formula we recover and extend several enumerative results about trees. In particular, we extend some…
A Gray code for a combinatorial class is a method for listing the objects in the class so that successive objects differ in some prespecified, small way, typically expressed as a bounded Hamming distance. In a previous work, the authors of…
The Raney numbers $R_{p,r}(n)$ are a two-parameter generalization of the Catalan numbers that were introduced by Raney in his investigation of functional composition patterns \cite{Raney}. We give a new combinatorial interpretation for all…
In this article, we present a binary tree with vertices given by rational functions $p(x)/q(x)$; the root and functional derivation of children are inspired by continued fractions. We prove some special properties of the tree. For example,…
Motivated by the question of how macromolecules assemble, the notion of an {\it assembly tree} of a graph is introduced. Given a graph $G$, the paper is concerned with enumerating the number of assembly trees of $G$, a problem that applies…
We study some essential arithmetic properties of a new tree-based number representation, {\em hereditarily binary numbers}, defined by applying recursively run-length encoding of bijective base-2 digits. Our representation expresses giant…