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Recent advances in neural recording technology allow simultaneously recording action potentials from hundreds to thousands of neurons in awake, behaving animals. However, characterizing spike patterns in the resulting data, and linking…

Artificial and biological systems may evolve similar computational solutions despite fundamental differences in architecture and learning mechanisms -- a form of convergent evolution. We demonstrate this phenomenon through large-scale…

Neurons and Cognition · Quantitative Biology 2025-07-04 Guobin Shen , Dongcheng Zhao , Yiting Dong , Qian Zhang , Yi Zeng

Arctic sea ice plays a critical role in regulating Earth's climate system, significantly influencing polar ecological stability and human activities in coastal regions. Recent advances in artificial intelligence have facilitated the…

Machine Learning · Computer Science 2026-02-04 Jingyi Xu , Shengnan Wang , Weidong Yang , Siwei Tu , Lei Bai , Ben Fei

Brain age prediction based on neuroimaging data could help characterize both the typical brain development and neuropsychiatric disorders. Pattern recognition models built upon functional connectivity (FC) measures derived from resting…

Computer Vision and Pattern Recognition · Computer Science 2018-01-15 Hongming Li , Theodore D. Satterthwaite , Yong Fan

The local circuitry of the mammalian brain is a focus of the search for generic computational principles because it is largely conserved across species and modalities. In 2014 a model was proposed representing all neurons and synapses of…

The construction of brain graphs from functional Magnetic Resonance Imaging (fMRI) data plays a crucial role in enabling graph machine learning for neuroimaging. However, current practices often rely on rigid pipelines that overlook…

Machine Learning · Computer Science 2025-08-19 Qinwen Ge , Roza G. Bayrak , Anwar Said , Catie Chang , Xenofon Koutsoukos , Tyler Derr

The evidence indicates that intracranial EEG connectivity, as estimated from daily resting state recordings from epileptic patients, may be capable of identifying preictal states. In this study, we employed hyperbolic embedding of brain…

Neurons and Cognition · Quantitative Biology 2025-05-28 Martin Guillemaud , Louis Cousyn , Vincent Navarro , Mario Chavez

In this paper, we introduce PredBench, a benchmark tailored for the holistic evaluation of spatio-temporal prediction networks. Despite significant progress in this field, there remains a lack of a standardized framework for a detailed and…

Machine Learning · Computer Science 2024-07-15 ZiDong Wang , Zeyu Lu , Di Huang , Tong He , Xihui Liu , Wanli Ouyang , Lei Bai

Neuromechanics aims to understand the link between an animal's neural activity and its physical behaviors. Recent advances in experimental and machine learning techniques enable simultaneous recordings of neural and locomotion dynamics over…

Biological Physics · Physics 2026-05-06 Alexander E. Cohen , Jörn Dunkel

The availability of large-scale neuronal population datasets necessitates new methods to model population dynamics and extract interpretable, scientifically translatable insights. Existing deep learning methods often overlook the biological…

Neurons and Cognition · Quantitative Biology 2024-11-14 Parsa Delavari , Ipek Oruc , Timothy H Murphy

This paper continues the research that considers a new cognitive model based strongly on the human brain. In particular, it considers the neural binding structure of an earlier paper. It also describes some new methods in the areas of image…

Artificial Intelligence · Computer Science 2018-12-11 Kieran Greer

We present a multi-scale differentiable brain modeling workflow utilizing BrainPy, a unique differentiable brain simulator that combines accurate brain simulation with powerful gradient-based optimization. We leverage this capability of…

Neural and Evolutionary Computing · Computer Science 2024-09-26 Chaoming Wang , Muyang Lyu , Tianqiu Zhang , Sichao He , Si Wu

Efficient model selection for identifying a suitable pre-trained neural network to a downstream task is a fundamental yet challenging task in deep learning. Current practice requires expensive computational costs in model training for…

Machine Learning · Computer Science 2022-01-19 Chunheng Jiang , Tejaswini Pedapati , Pin-Yu Chen , Yizhou Sun , Jianxi Gao

A central challenge in the computational modeling of neural dynamics is the trade-off between accuracy and simplicity. At the level of individual neurons, nonlinear dynamics are both experimentally established and essential for neuronal…

Longitudinal biomedical studies monitor individuals over time to capture dynamics in brain development, disease progression, and treatment effects. However, estimating trajectories of brain biomarkers is challenging due to biological…

Machine Learning · Computer Science 2025-04-15 Vasiliki Tassopoulou , Haochang Shou , Christos Davatzikos

Imbalanced learning remains a fundamental challenge in tabular data applications. Despite decades of research and numerous proposed algorithms, a systematic empirical understanding of how different imbalanced learning methods behave across…

Machine Learning · Computer Science 2026-05-15 Ruizhe Liu , Jiaqi Luo

Numerical weather prediction has traditionally been based on physical models of the atmosphere. Recently, however, the rise of deep learning has created increased interest in purely data-driven medium-range weather forecasting with first…

Atmospheric and Oceanic Physics · Physics 2021-03-17 Stephan Rasp , Nils Thuerey

Deep convolutional neural networks (CNNs) have structures that are loosely related to that of the primate visual cortex. Surprisingly, when these networks are trained for object classification, the activity of their early, intermediate, and…

Neurons and Cognition · Quantitative Biology 2016-10-18 Omid Rezai , Pinar Boyraz Jentsch , Bryan Tripp

Recent works have highlighted the significance of memory mechanisms in LLM-based agents, which enable them to store observed information and adapt to dynamic environments. However, evaluating their memory capabilities still remains…

Computation and Language · Computer Science 2025-06-30 Haoran Tan , Zeyu Zhang , Chen Ma , Xu Chen , Quanyu Dai , Zhenhua Dong

Study Objectives: Fetal sleep is a vital yet underexplored aspect of prenatal neurodevelopment. Its cyclic organization reflects the maturation of central neural circuits, and disturbances in these patterns may offer some of the earliest…

Neurons and Cognition · Quantitative Biology 2026-01-19 Weitao Tang , Johann Vargas-Calixto , Nasim Katebi , Robert Galinsky , Gari D. Clifford , Faezeh Marzbanrad