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Automated fetal brain extraction from full-uterus MRI is a challenging task due to variable head sizes, orientations, complex anatomy, and prevalent artifacts. While deep-learning (DL) models trained on synthetic images have been successful…

Image and Video Processing · Electrical Eng. & Systems 2024-10-30 Javid Dadashkarimi , Valeria Pena Trujillo , Camilo Jaimes , Lilla Zöllei , Malte Hoffmann

Electromagnetic stimulation of the human brain is a key tool for the neurophysiological characterization and diagnosis of several neurological disorders. Transcranial magnetic stimulation (TMS) is one procedure that is commonly used…

Machine Learning · Computer Science 2020-02-04 Essam A. Rashed , Jose Gomez-Tames , Akimasa Hirata

Decoding EEG signals of different mental states is a challenging task for brain-computer interfaces (BCIs) due to nonstationarity of perceptual decision processes. This paper presents a novel boosted convolutional neural networks (ConvNets)…

Computer Vision and Pattern Recognition · Computer Science 2018-10-25 Yang Li , Mengying Lei , Xianrui Zhang , Weigang Cui , Yuzhu Guo , Ting-Wen Huang , Hua-Liang Wei

Decoding functional magnetic resonance imaging (fMRI) signals into text has been a key challenge in the neuroscience community, with the potential to advance brain-computer interfaces and uncover deeper insights into brain mechanisms.…

Neurons and Cognition · Quantitative Biology 2025-06-10 Weikang Qiu , Zheng Huang , Haoyu Hu , Aosong Feng , Yujun Yan , Rex Ying

Functional magnetic resonance imaging (fMRI) is a powerful tool for probing brain function, yet reliable clinical diagnosis is hampered by low signal-to-noise ratios, inter-subject variability, and the limited frequency awareness of…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Junhao Jia , Yifei Sun , Yunyou Liu , Cheng Yang , Changmiao Wang , Feiwei Qin , Yong Peng , Wenwen Min

A fundamental challenge in neuroscience is to understand what structure in the world is represented in spatially distributed patterns of neural activity from multiple single-trial measurements. This is often accomplished by learning a…

Neural and Evolutionary Computing · Computer Science 2020-07-01 Jesse A. Livezey , Kristofer E. Bouchard , Edward F. Chang

Deep learning methods have recently made notable advances in the tasks of classification and representation learning. These tasks are important for brain imaging and neuroscience discovery, making the methods attractive for porting to a…

Neural and Evolutionary Computing · Computer Science 2014-02-20 Sergey M. Plis , Devon R. Hjelm , Ruslan Salakhutdinov , Vince D. Calhoun

Machine Learning (ML) is increasingly being used for computer aided diagnosis of brain related disorders based on structural magnetic resonance imaging (MRI) data. Most of such work employs biologically and medically meaningful hand-crafted…

Machine Learning · Computer Science 2018-05-04 Ayush Jaiswal , Dong Guo , Cauligi S. Raghavendra , Paul Thompson

The real-time assessment of complex motor skills presents a challenge in fields such as surgical training and rehabilitation. Recent advancements in neuroimaging, particularly functional near-infrared spectroscopy (fNIRS), have enabled…

Signal Processing · Electrical Eng. & Systems 2025-04-08 Aseem Subedi , Rahul , Lora Cavuoto , Steven Schwaitzberg , Matthew Hackett , Jack Norfleet , Suvranu De

Deep neural networks often suffer from a critical limitation known as catastrophic forgetting, where performance on past tasks degrades after learning new ones. This paper introduces a novel continual learning approach inspired by human…

Machine Learning · Computer Science 2025-09-16 Prital Bamnodkar

Task-driven semantic video/image coding has drawn considerable attention with the development of intelligent media applications, such as license plate detection, face detection, and medical diagnosis, which focuses on maintaining the…

Image and Video Processing · Electrical Eng. & Systems 2021-06-08 Xin Li , Jun Shi , Zhibo Chen

BACKGROUND AND PURPOSE: Deep learning has been demonstrated effective in many neuroimaging applications. However, in many scenarios, the number of imaging sequences capturing information related to small vessel disease lesions is…

We introduce TempoCave, a novel visualization application for analyzing dynamic brain networks, or connectomes. TempoCave provides a range of functionality to explore metrics related to the activity patterns and modular affiliations of…

Human-Computer Interaction · Computer Science 2020-01-16 Ran Xu , Manu Mathew Thomas , Alex Leow , Olusola Ajilore , Angus G. Forbes

Neuroradiologists and neurosurgeons increasingly opt to use functional magnetic resonance imaging (fMRI) to map functionally relevant brain regions for noninvasive presurgical planning and intraoperative neuronavigation. This application…

Methodology · Statistics 2023-06-07 Andrew S. Whiteman , Andreas J. Bartsch , Jian Kang , Timothy D. Johnson

Monocular depth estimation and defocus estimation are two fundamental tasks in computer vision. Most existing methods treat depth estimation and defocus estimation as two separate tasks, ignoring the strong connection between them. In this…

Computer Vision and Pattern Recognition · Computer Science 2022-08-23 Renzhi He , Hualin Hong , Boya Fu , Fei Liu

Neuroanatomical segmentation in magnetic resonance imaging (MRI) of the brain is a prerequisite for volume, thickness and shape measurements. This work introduces a new highly accurate and versatile method based on 3D convolutional neural…

Quantitative Methods · Quantitative Biology 2019-02-07 Philip Novosad , Vladimir Fonov , D. Louis Collins

In-scanner motion degrades the quality of magnetic resonance imaging (MRI) thereby reducing its utility in the detection of clinically relevant abnormalities. We introduce a deep learning-based MRI artifact reduction model (DMAR) to…

Image and Video Processing · Electrical Eng. & Systems 2020-11-03 Yijun Zhao , Jacek Ossowski , Xuming Wang , Shangjin Li , Orrin Devinsky , Samantha P. Martin , Heath R. Pardoe

Task functional magnetic resonance imaging (fMRI) is a type of neuroimaging data used to identify areas of the brain that activate during specific tasks or stimuli. These data are conventionally modeled using a massive univariate approach…

Methodology · Statistics 2022-11-04 Daniel A. Spencer , David Bolin , Amanda F. Mejia

Automated medical image segmentation, specifically using deep learning, has shown outstanding performance in semantic segmentation tasks. However, these methods rarely quantify their uncertainty, which may lead to errors in downstream…

Computer Vision and Pattern Recognition · Computer Science 2018-06-25 Zach Eaton-Rosen , Felix Bragman , Sotirios Bisdas , Sebastien Ourselin , M. Jorge Cardoso

Functional MRI (fMRI) is widely used to examine brain functionality by detecting alteration in oxygenated blood flow that arises with brain activity. This work aims to investigate the neurological variation of human brain responses during…

Computer Vision and Pattern Recognition · Computer Science 2023-09-28 Naveen Kanigiri , Manohar Suggula , Debanjali Bhattacharya , Neelam Sinha