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Recommendation model interpretation aims to reveal the relationships between inputs, model internal representations and outputs to enhance the transparency, interpretability, and trustworthiness of recommendation systems. However, the…

Information Retrieval · Computer Science 2026-01-27 Jiayin Wang , Xiaoyu Zhang , Weizhi Ma , Zhiqiang Guo , Min Zhang

Sparse autoencoders (SAEs) are increasingly used for safety-relevant applications including alignment detection and model steering. These use cases require SAE latents to be as atomic as possible. Each latent should represent a single…

Machine Learning · Computer Science 2026-04-07 Matthew Levinson

Large Language Models (LLMs) have achieved strong complex reasoning capabilities through Chain-of-Thought (CoT) reasoning. However, their reasoning patterns remain too complicated to analyze. While Sparse Autoencoders (SAEs) have emerged as…

Machine Learning · Computer Science 2026-03-04 Xuan Yang , Jiayu Liu , Yuhang Lai , Hao Xu , Zhenya Huang , Ning Miao

Dense embeddings deliver strong retrieval performance but often lack interpretability and controllability. This paper introduces a novel approach using sparse autoencoders (SAE) to interpret and control dense embeddings via the learned…

Information Retrieval · Computer Science 2025-02-25 Hao Kang , Tevin Wang , Chenyan Xiong

Sparse autoencoders (SAEs) are one of the main methods to interpret the inner workings of deep neural networks (DNNs), decomposing activations into higher-dimensional features. However, they exhibit critical shortcomings where a large…

Machine Learning · Computer Science 2026-05-19 Michał Brzozowski , Neo Christopher Chung

Sparse autoencoders (SAEs) have become a standard tool for mechanistic interpretability in autoregressive large language models (LLMs), enabling researchers to extract sparse, human-interpretable features and intervene on model behavior.…

Machine Learning · Computer Science 2026-02-06 Xu Wang , Bingqing Jiang , Yu Wan , Baosong Yang , Lingpeng Kong , Difan Zou

Deep learning, particularly with the advancement of Large Language Models, has transformed biomolecular modeling, with protein language models such as ESM inspiring emerging RNA language models such as RiNALMo. Recent work has begun…

Biomolecules · Quantitative Biology 2026-05-18 Taehan Kim , Sangdae Nam

We present the first systematic study of Sparse Autoencoders (SAEs) on video representations. Standard SAEs decompose video into interpretable, monosemantic features but destroy temporal coherence: hard TopK selection produces unstable…

Computer Vision and Pattern Recognition · Computer Science 2026-04-07 Atahan Dokme , Sriram Vishwanath

Sparse autoencoders (SAEs) are widely used in mechanistic interpretability research for large language models; however, the state-of-the-art method of using $k$-sparse autoencoders lacks a theoretical grounding for selecting the…

Machine Learning · Computer Science 2025-08-11 Sewoong Lee , Adam Davies , Marc E. Canby , Julia Hockenmaier

Recent work shows that Sparse Autoencoders (SAE) applied to large language model (LLM) layers have neurons corresponding to interpretable concepts. These SAE neurons can be modified to align generated outputs, but only towards…

Computation and Language · Computer Science 2025-07-01 Ananya Joshi , Celia Cintas , Skyler Speakman

Sparse Autoencoders (SAEs) have emerged as a powerful unsupervised method for extracting sparse representations from language models, yet scalable training remains a significant challenge. We introduce a suite of 256 SAEs, trained on each…

RFdiffusion is a popular and well-established model for generation of protein structures. However, this generative process offers limited insight into its internal representations and how they contribute to the final protein structure.…

Quantitative Methods · Quantitative Biology 2025-12-01 Wojciech Zarzecki , Paulina Szymczak , Ewa Szczurek , Kamil Deja

As black box models and pretrained models gain traction in time series applications, understanding and explaining their predictions becomes increasingly vital, especially in high-stakes domains where interpretability and trust are…

Machine Learning · Computer Science 2026-01-16 Khalid Oublal , Quentin Bouniot , Qi Gan , Stephan Clémençon , Zeynep Akata

Protein language models have revolutionized structure prediction, but their nonlinear nature obscures how sequence representations inform structure prediction. While sparse autoencoders (SAEs) offer a path to interpretability here by…

Biomolecules · Quantitative Biology 2025-03-13 Nithin Parsan , David J. Yang , John J. Yang

Recent interpretability work on large language models (LLMs) has been increasingly dominated by a feature-discovery approach with the help of proxy modules. Then, the quality of features learned by, e.g., sparse auto-encoders (SAEs), is…

Machine Learning · Computer Science 2025-10-28 Mengyu Ye , Jun Suzuki , Tatsuro Inaba , Tatsuki Kuribayashi

Unlearning specific concepts in text-to-image diffusion models has become increasingly important for preventing undesirable content generation. Among prior approaches, sparse autoencoder (SAE)-based methods have attracted attention due to…

Machine Learning · Computer Science 2026-05-13 Hyeonjin Kim , Hangyeol Jung , Heechan Yun , Sungjun Yun , Dong-Jun Han

Sparse autoencoders (SAEs) are widely used in mechanistic interpretability to project LLM activations onto sparse latent spaces. However, sparsity alone is an imperfect proxy for interpretability, and current training objectives often…

Machine Learning · Computer Science 2026-04-09 Vivek Narayanaswamy , Kowshik Thopalli , Bhavya Kailkhura , Wesam Sakla

Variational Auto-Encoder (VAE) has been widely applied as a fundamental generative model in machine learning. For complex samples like imagery objects or scenes, however, VAE suffers from the dimensional dilemma between reconstruction…

Machine Learning · Computer Science 2020-02-18 Deli Zhao , Jiapeng Zhu , Bo Zhang

Large language models have achieved remarkable capabilities across diverse tasks, yet their internal decision-making processes remain largely opaque, limiting our ability to inspect, control, and systematically improve them. This opacity…

Unlearning methods for vision-language models (VLMs) have primarily adapted techniques from large language models (LLMs), relying on weight updates that demand extensive annotated forget sets. Moreover, these methods perform unlearning at a…

Computer Vision and Pattern Recognition · Computer Science 2025-03-21 Qing Li , Jiahui Geng , Derui Zhu , Fengyu Cai , Chenyang Lyu , Fakhri Karray