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We study diffusion of information packets on several classes of structured networks. Packets diffuse from a randomly chosen node to a specified destination in the network. As local transport rules we consider random diffusion and an…

Statistical Mechanics · Physics 2015-06-24 Bosiljka Tadic , Stefan Thurner

Graph models are widely used to study diffusion processes in contact networks. Recent data-driven research has highlighted the significance of indirect links, where interactions are possible when two nodes visit the same place at different…

Social and Information Networks · Computer Science 2019-11-12 Md Shahzamal , Raja Jurdak , Bernard Mans , Frank De Hoog , Dean Paini

This work addresses the intrinsic relationship between trees and networks (i.e. graphs). A complete (invertible) mapping is presented which allows trees to be mapped into weighted graphs and then backmapped into the original tree without…

Physics and Society · Physics 2008-08-07 Luciano da Fontoura Costa , Francisco Aparecido Rodrigues

We introduce propagation kernels, a general graph-kernel framework for efficiently measuring the similarity of structured data. Propagation kernels are based on monitoring how information spreads through a set of given graphs. They leverage…

Machine Learning · Statistics 2014-10-14 Marion Neumann , Roman Garnett , Christian Bauckhage , Kristian Kersting

We introduce Joint Probability Trees (JPT), a novel approach that makes learning of and reasoning about joint probability distributions tractable for practical applications. JPTs support both symbolic and subsymbolic variables in a single…

Machine Learning · Computer Science 2023-02-15 Daniel Nyga , Mareike Picklum , Tom Schierenbeck , Michael Beetz

Tree structures are ubiquitous in data across many domains, and many datasets are naturally modelled by unobserved tree structures. In this paper, first we review the theory of random fragmentation processes [Bertoin, 2006], and a number of…

Machine Learning · Statistics 2015-09-17 Hong Ge , Yarin Gal , Zoubin Ghahramani

Information spread on networks can be efficiently modeled by considering three features: documents' content, time of publication relative to other publications, and position of the spreader in the network. Most previous works model up to…

Machine Learning · Computer Science 2022-12-13 Gaël Poux-Médard , Julien Velcin , Sabine Loudcher

Recent work has attempted to use whole-genome sequence data from pathogens to reconstruct the transmission trees linking infectors and infectees in outbreaks. However, transmission trees from one outbreak do not generalize to future…

Quantitative Methods · Quantitative Biology 2023-10-24 Eben Kenah , Tom Britton , M. Elizabeth Halloran , Ira M. Longini

Climate change is reshaping species interactions and movement across fragmented landscapes. Despite this, most mathematical models assume random diffusion, overlooking the influence of directed movement. Here, we develop a graph based…

Dynamical Systems · Mathematics 2026-04-08 Pranali Roy Chowdhury , Soumyendu Raha

Daily internet communication relies heavily on tree-structured graphs, embodied by popular data formats such as XML and JSON. However, many recent generative (probabilistic) models utilize neural networks to learn a probability distribution…

Machine Learning · Computer Science 2024-08-20 Milan Papež , Martin Rektoris , Tomáš Pevný , Václav Šmídl

Improving the understanding of diffusive processes in networks with complex topologies is one of the main challenges of today's complexity science. Each network possesses an intrinsic diffusive potential that depends on its structural…

Data Analysis, Statistics and Probability · Physics 2023-11-02 T. A. Schieber , L. C. Carpi , P. M. Pardalos , C. Masoller , A. Díaz-Guilera , M. G. Ravetti

Understanding the geometry of learned distributions is fundamental to improving and interpreting diffusion models, yet systematic tools for exploring their landscape remain limited. Standard latent-space interpolations fail to respect the…

Machine Learning · Statistics 2026-02-26 Elio Moreau , Florentin Coeurdoux , Grégoire Ferre , Eric Vanden-Eijnden

Deciphering the associations between network connectivity and nodal attributes is one of the core problems in network science. The dependency structure and high-dimensionality of networks pose unique challenges to traditional dependency…

Methodology · Statistics 2024-06-27 Youjin Lee , Cencheng Shen , Carey E. Priebe , Joshua T. Vogelstein

Source localization in graph information propagation is essential for mitigating network disruptions, including misinformation spread, cyber threats, and infrastructure failures. Existing deep generative approaches face significant…

Social and Information Networks · Computer Science 2025-09-24 Hongyi Chen , Jingtao Ding , Xiaojun Liang , Yong Li , Xiao-Ping Zhang

Interaction patterns at the individual level influence the behaviour of diffusion over contact networks. Most of the current diffusion models only consider direct interactions among individuals to build underlying infectious items…

Social and Information Networks · Computer Science 2019-06-07 Md Shahzamal , Raja Jurdak , Bernard Mans , Frank de Hoog

Information diffusion in networks can be used to model many real-world phenomena, including rumor spreading on online social networks, epidemics in human beings, and malware on the Internet. Informally speaking, the source localization…

Social and Information Networks · Computer Science 2015-10-08 Kai Zhu , Lei Ying

We study the problem of identifying infection sources in a network based on the network topology, and a subset of infection timestamps. In the case of a single infection source in a tree network, we derive the maximum likelihood estimator…

Social and Information Networks · Computer Science 2019-03-06 Wenchang Tang , Feng Ji , Wee Peng Tay

Deep Neural Networks (DNNs) have recently shown state of the art performance on semantic segmentation tasks, however, they still suffer from problems of poor boundary localization and spatial fragmented predictions. The difficulties lie in…

Computer Vision and Pattern Recognition · Computer Science 2018-10-29 Peng Jiang , Fanglin Gu , Yunhai Wang , Changhe Tu , Baoquan Chen

We present \textit{CluProp}, a novel framework that reimagines varied-density clustering in high-dimensional spaces as a label propagation process over neighborhood graphs. Our approach formally bridges the gap between density-based…

Machine Learning · Computer Science 2026-05-04 Yingtao Zheng , Hugo Phibbs , Ninh Pham

Our ability to uncover complex network structure and dynamics from data is fundamental to understanding and controlling collective dynamics in complex systems. Despite recent progress in this area, reconstructing networks with stochastic…

Physics and Society · Physics 2014-07-18 Zhesi Shen , Wen-Xu Wang , Ying Fan , Zengru Di , Ying-Cheng Lai