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Related papers: Influence of boundary geometry on active patterns

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Inspired by recent experimental observation of patterning at the membrane of a living cell, we propose a generic model for the dynamics of a fluctuating interface driven by particle-like inclusions which stimulate its growth. We find that…

Soft Condensed Matter · Physics 2019-07-25 F. Cagnetta , M. R. Evans , D. Marenduzzo

The space of possible behaviors complex biological systems may exhibit is unimaginably vast, and these systems often appear to be stochastic, whether due to variable noisy environmental inputs or intrinsically generated chaos. The brain is…

Neurons and Cognition · Quantitative Biology 2025-04-01 Jacob T. Crosser , Braden A. W. Brinkman

Controlling the collective motion of epithelial cell populations is fundamental for understanding multicellular self-organization and for advancing tissue engineering. Under spatial confinement, cells are known to exhibit either vortex…

Soft Condensed Matter · Physics 2025-09-09 Ryo Ienaga , Kazuyuki Shigeta , Tatsuya Fukuyama , Kazusa Beppu , Yusuke T. Maeda

Morphogenesis emerges from dynamic feedback among geometry, mechanics, and chemistry; however, disentangling these contributions in living systems remains challenging. Here, we focus on the interplay between geometry and mechanics by…

The impact of magnetic geometry on zonal-flow generation in ion temperature gradient driven turbulence is investigated by means of linear and nonlinear gyrokinetic simulations. The modulation of geodesic curvature on various configurations…

Plasma Physics · Physics 2026-03-02 Motoki Nakata , Seikichi Matsuoka

Curvature plays a central role in the proper function of many biological processes. With active matter being a standard framework for understanding many aspects of the physics of life, it is natural to ask what effect curvature has on the…

Soft Condensed Matter · Physics 2026-01-27 Euan D. Mackay , Giulia Janzen , D. A. Matoz Fernandez , Rastko Sknepnek

Motor-proteins are responsible for transport inside cells. Harnessing their activity is key towards developing new nano-technologies, or functional biomaterials. Cytoskeleton-like networks, recently tailored in vitro, result from the…

Soft Condensed Matter · Physics 2016-06-21 Pau Guillamat , Jordi Ignés-Mullol , Francesc Sagués

We consider pattern formation using reaction-diffusion equation on various non-uniformly curved surfaces. We explore how, in general, curvature and, in particular the domain shape would affect the pattern formation in these geometries. As…

Soft Condensed Matter · Physics 2017-05-08 Sankaran Nampoothiri , Amal Medhi

The spatiotemporal organisation of proteins and lipids on the cell surface has direct functional consequences for signaling, sorting and endocytosis. Earlier studies have shown that multiple types of membrane proteins including…

Soft Condensed Matter · Physics 2022-09-14 Suvrajit Saha , Amit Das , Chandrima Patra , Anupama Ambika Anilkumar , Parijat Sil , Satyajit Mayor , Madan Rao

In biological tissues, it is now well-understood that mechanical cues are a powerful mechanism for pattern regulation. While much work has focused on interactions between cells and external substrates, recent experiments suggest that cell…

Soft Condensed Matter · Physics 2017-11-01 Michael Czajkowski , Dapeng Bi , M. Lisa Manning , M. Cristina Marchetti

Many cellular processes require a polarization axis which generally initially emerges as an inhomogeneous distribution of molecular markers in the cell. We present a simple analytical model of a general mechanism of cell polarization taking…

Cell Behavior · Quantitative Biology 2009-10-21 Rhoda J. Hawkins , Olivier Benichou , Matthieu Piel , Raphael Voituriez

The role of boundary layers in conventional liquid crystals is commonly subsumed in their anchoring on confining walls. In the classical view, anchoring enslaves the orientational field of the passive material under equilibrium conditions.…

We examine how the shape of cells and the geometry of experiment affect the reaction-diffusion kinetics at the binding between target and probe molecules on molecular biochips. In particular, we compare the binding kinetics for the probes…

Quantitative Methods · Quantitative Biology 2011-04-05 V. R. Chechetkin

We coarse-grain a model of closely-packed ellipses that can vary their aspect ratio to derive continuum equations for materials comprising confluent deformable particles such as epithelial cell layers. We show that contractile nearest…

Soft Condensed Matter · Physics 2025-01-14 Mehrana R. Nejad , Julia M Yeomans

Controlling the motion of active matter is a central issue that has recently garnered significant attention in fields ranging from non-equilibrium physics to chemical engineering and biology. Distinct methods for controlling active matter…

Soft Condensed Matter · Physics 2023-07-25 Archit Negi , Kazusa Beppu , Yusuke T. Maeda

Pattern dynamics on curved surfaces are found everywhere in nature. The geometry of surfaces have been shown to influence dynamics and play a functional role, yet a comprehensive understanding is still elusive. Here, we report for the first…

Pattern Formation and Solitons · Physics 2022-06-15 Ryosuke Nishide , Shuji Ishihara

We experimentally demonstrate the emergence of directional rotation in thermally active-passive colloidal structures under optical confinement. The observed handedness of rotation of the structure can be controlled by changing the relative…

Soft Condensed Matter · Physics 2023-09-25 Rahul Chand , Chaudhary Eksha Rani , Diptabrata Paul , G V Pavan Kumar

Topological defects in active polar fluids can organise spontaneous flows and influence macroscopic density patterns. Both of them play, for example, an important role during animal development. Yet the influence of density on active flows…

Inspired by active shape morphing in developing tissues and biomaterials, we investigate two generic mechanochemical models where the deformations of a thin elastic sheet are driven by, and in turn affect, the concentration gradients of a…

Soft Condensed Matter · Physics 2021-07-14 Andrei Zakharov , Kinjal Dasbiswas

We analyze an axisymmetric magnetohydrodynamics configuration, describing the morphology of a purely differentially rotating thin plasma disk, in which linear and non-linear perturbations are triggered associated with microscopic magnetic…

Solar and Stellar Astrophysics · Physics 2018-10-02 Giovanni Montani , Mariachiara Rizzo , Nakia Carlevaro