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Sparse Autoencoders for transformer-based language models are typically defined independently per layer. In this work we analyze statistical relationships between features in adjacent layers to understand how features evolve through a…

Machine Learning · Computer Science 2024-11-19 Daniel Balcells , Benjamin Lerner , Michael Oesterle , Ediz Ucar , Stefan Heimersheim

Standard Sparse Autoencoders (SAEs) excel at discovering a dictionary of a model's learned features, offering a powerful observational lens. However, the ambiguous and ungrounded nature of these features makes them unreliable instruments…

Machine Learning · Computer Science 2025-09-29 Jianrong Ding , Muxi Chen , Chenchen Zhao , Qiang Xu

Sensitive directions experiments attempt to understand the computational features of Language Models (LMs) by measuring how much the next token prediction probabilities change by perturbing activations along specific directions. We extend…

Machine Learning · Computer Science 2024-11-19 Daniel J. Lee , Stefan Heimersheim

One of the roadblocks to a better understanding of neural networks' internals is \textit{polysemanticity}, where neurons appear to activate in multiple, semantically distinct contexts. Polysemanticity prevents us from identifying concise,…

Machine Learning · Computer Science 2023-10-05 Hoagy Cunningham , Aidan Ewart , Logan Riggs , Robert Huben , Lee Sharkey

Sparse autoencoders (SAEs) interpret neural network representations by decomposing activations into sparse combinations of dictionary atoms. However, SAEs assume features combine additively through linear reconstruction, an assumption that…

Machine Learning · Computer Science 2026-05-26 Panagiotis Koromilas , Andreas D. Demou , James Oldfield , Yannis Panagakis , Mihalis Nicolaou

Transformer models have become state-of-the-art in decoding stimuli and behavior from neural activity, significantly advancing neuroscience research. Yet greater transparency in their decision-making processes would substantially enhance…

Quantitative Methods · Quantitative Biology 2025-06-18 Laurence Freeman , Philip Shamash , Vinam Arora , Caswell Barry , Tiago Branco , Eva Dyer

Sparse autoencoders (SAEs) promise a unified approach for mechanistic interpretability, concept discovery, and model steering in LLMs and LVLMs. However, realizing this potential requires learned features to be both interpretable and…

Machine Learning · Computer Science 2026-04-01 Akshay Kulkarni , Tsui-Wei Weng , Vivek Narayanaswamy , Shusen Liu , Wesam A. Sakla , Kowshik Thopalli

Recently, sparse autoencoders (SAEs) have emerged as a promising technique for interpreting activations in foundation models by disentangling features into a sparse set of concepts. However, identifying the optimal level of sparsity for…

Machine Learning · Computer Science 2026-04-17 Dongsheng Wang , Jinsen Zhang , Dawei Su , Hui Huang

The standard sparse-autoencoder (SAE) interpretability protocol labels each feature from its top-activating contexts and validates by single-feature steering. We propose the pairwise matrix protocol, co-varying steering coefficient with…

Machine Learning · Computer Science 2026-05-06 Michael A. Riegler , Birk Sebastian Frostelid Torpmann-Hagen

Recent work by Anthropic on Mechanistic interpretability claims to understand and control Large Language Models by extracting human-interpretable features from their neural activation patterns using sparse autoencoders (SAEs). If…

Machine Learning · Computer Science 2026-01-07 Raphael Ronge , Markus Maier , Frederick Eberhardt

Sparse autoencoders (SAEs) have emerged as a promising approach for learning interpretable features from neural network activations. However, the optimization landscape for SAE training can be challenging due to correlations in the input…

Machine Learning · Computer Science 2025-11-19 Ashwin Saraswatula , David Klindt

Sparse Autoencoders (SAEs) have recently emerged as powerful tools for interpreting and steering the internal representations of large language models (LLMs). However, conventional approaches to analyzing SAEs typically rely solely on…

Machine Learning · Computer Science 2025-09-24 Dong Shu , Xuansheng Wu , Haiyan Zhao , Mengnan Du , Ninghao Liu

Deterministically controlling the target generation language of large multilingual language models (LLMs) remains a fundamental challenge, particularly in zero-shot settings where neither explicit language prompts nor fine-tuning are…

Computation and Language · Computer Science 2025-10-17 Cheng-Ting Chou , George Liu , Jessica Sun , Cole Blondin , Kevin Zhu , Vasu Sharma , Sean O'Brien

Intermediate layers of large language models (LLMs) best predict human brain responses to language, one of the most robust findings in computational neurolinguistics, yet why remains mechanistically unexplained. We address this gap by…

Computation and Language · Computer Science 2026-05-25 Dongxin Guo , Jikun Wu , Siu Ming Yiu

It is assumed that sparse autoencoders (SAEs) decompose polysemantic activations into interpretable linear directions, as long as the activations are composed of sparse linear combinations of underlying features. However, we find that if an…

Machine Learning · Computer Science 2025-09-29 David Chanin , Tomáš Dulka , Adrià Garriga-Alonso

There is growing interest in leveraging mechanistic interpretability and controllability to better understand and influence the internal dynamics of large language models (LLMs). However, current methods face fundamental challenges in…

Computation and Language · Computer Science 2025-12-02 Ruben Härle , Felix Friedrich , Manuel Brack , Stephan Wäldchen , Björn Deiseroth , Patrick Schramowski , Kristian Kersting

Sparse Autoencoders (SAEs) are increasingly used to interpret foundation models, but their role as an actionable intervention space remains less understood, especially in vision. We study whether sparse visual features can be used not only…

Computer Vision and Pattern Recognition · Computer Science 2026-05-28 Gerasimos Chatzoudis , Zhuowei Li , Gemma E. Moran , Hao Wang , Dimitris N. Metaxas

Sparse autoencoders (SAEs) are widely used in mechanistic interpretability research for large language models; however, the state-of-the-art method of using $k$-sparse autoencoders lacks a theoretical grounding for selecting the…

Machine Learning · Computer Science 2025-08-11 Sewoong Lee , Adam Davies , Marc E. Canby , Julia Hockenmaier

Do the features learned by Sparse Autoencoders (SAEs) represent abstract meaning, or are they tied to how text is written? We investigate this question using Serbian digraphia as a controlled testbed: Serbian is written interchangeably in…

Computation and Language · Computer Science 2026-03-11 Sripad Karne

Sparse Autoencoders (SAEs) have emerged as a useful tool for interpreting the internal representations of neural networks. However, naively optimising SAEs for reconstruction loss and sparsity results in a preference for SAEs that are…

Machine Learning · Computer Science 2024-10-16 Kola Ayonrinde , Michael T. Pearce , Lee Sharkey