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The wide-spread adoption of representation learning technologies in clinical decision making strongly emphasizes the need for characterizing model reliability and enabling rigorous introspection of model behavior. While the former need is…

Machine Learning · Computer Science 2020-05-01 Jayaraman J. Thiagarajan , Prasanna Sattigeri , Deepta Rajan , Bindya Venkatesh

Implicit Neural Representations (INRs) are widely used to encode data as continuous functions, enabling the visualization of large-scale multivariate scientific simulation data with reduced memory usage. However, existing INR-based methods…

Computer Vision and Pattern Recognition · Computer Science 2026-03-04 Hyunsoo Son , Jeonghyun Noh , Suemin Jeon , Chaoli Wang , Won-Ki Jeong

We introduce Clinical ModernBERT, a transformer based encoder pretrained on large scale biomedical literature, clinical notes, and medical ontologies, incorporating PubMed abstracts, MIMIC IV clinical data, and medical codes with their…

Computation and Language · Computer Science 2025-04-08 Simon A. Lee , Anthony Wu , Jeffrey N. Chiang

Unsupervised sentence representation learning aims to transform input sentences into fixed-length vectors enriched with intricate semantic information while obviating the reliance on labeled data. Recent strides within this domain have been…

Computation and Language · Computer Science 2024-06-21 Bowen Zhang , Kehua Chang , Chunping Li

Medical document understanding has gained much attention recently. One representative task is the International Classification of Disease (ICD) diagnosis code assignment. Existing work adopts either RNN or CNN as the backbone network…

Computation and Language · Computer Science 2022-04-21 Ning Zhang , Maciej Jankowski

Neural network representation learning frameworks have recently shown to be highly effective at a wide range of tasks ranging from radiography interpretation via data-driven diagnostics to clinical decision support. This often superior…

Information Retrieval · Computer Science 2018-11-14 Xing Wei , Carsten Eickhoff

Sepsis is a leading cause of mortality in intensive care units (ICUs), yet existing research often relies on outdated datasets, non-reproducible preprocessing pipelines, and limited coverage of clinical interventions. We introduce…

Machine Learning · Computer Science 2025-10-29 Yong Huang , Zhongqi Yang , Amir Rahmani

Patients in the intensive care unit (ICU) require constant and close supervision. To assist clinical staff in this task, hospitals use monitoring systems that trigger audiovisual alarms if their algorithms indicate that a patient's…

Machine Learning · Computer Science 2020-07-15 Patrick Schwab , Emanuela Keller , Carl Muroi , David J. Mack , Christian Strässle , Walter Karlen

With the rapid growth of the scientific literature, manually selecting appropriate citations for a paper is becoming increasingly challenging and time-consuming. While several approaches for automated citation recommendation have been…

Computation and Language · Computer Science 2020-07-09 Binh Thanh Kieu , Inigo Jauregi Unanue , Son Bao Pham , Hieu Xuan Phan , Massimo Piccardi

Artificial intelligence (AI) is anticipated to emerge as a pivotal enabler for the forthcoming sixth-generation (6G) wireless communication systems. However, current research efforts regarding large AI models for wireless communications…

Systems and Control · Electrical Eng. & Systems 2025-09-16 Yuhang Li , Yang Lu , Wei Chen , Bo Ai , Zhiguo Ding , Dusit Niyato

This study is dedicated to exploring the application of prompt learning methods to advance Named Entity Recognition (NER) within the medical domain. In recent years, the emergence of large-scale models has driven significant progress in NER…

Computation and Language · Computer Science 2025-06-04 Jinzhu Yang

Patients whose transfer to the Intensive Care Unit (ICU) is unplanned are prone to higher mortality rates than those who were admitted directly to the ICU. Recent advances in machine learning to predict patient deterioration have introduced…

Machine Learning · Computer Science 2021-01-26 Julien Grand-Clement , Carri W. Chan , Vineet Goyal , Gabriel Escobar

Intensive care unit (ICU) is a crucial hospital department that handles life-threatening cases. Nowadays machine learning (ML) is being leveraged in healthcare ubiquitously. In recent years, management of ICU became one of the most…

Machine Learning · Computer Science 2025-05-26 Alexander Gabitashvili , Philipp Kellmeyer

Machine learning systems show significant promise for forecasting patient adverse events via risk scores. However, these risk scores implicitly encode assumptions about future interventions that the patient is likely to receive, based on…

An essential aspect of prioritizing incident tickets for resolution is efficiently labeling tickets with fine-grained categories. However, ticket data is often complex and poses several unique challenges for modern machine learning methods:…

Computation and Language · Computer Science 2023-07-04 Zhexiong Liu , Cris Benge , Siduo Jiang

Developing AI systems capable of nuanced ethical reasoning is critical as they increasingly influence human decisions, yet existing models often rely on superficial correlations rather than principled moral understanding. This paper…

Computers and Society · Computer Science 2025-10-16 Mahamodul Hasan Mahadi , Md. Nasif Safwan , Souhardo Rahman , Shahnaj Parvin , Aminun Nahar , Kamruddin Nur

Despite the growing scale of medical Vision-Language datasets, the impact of dataset quality on model performance remains under-explored. We introduce Open-PMC, a high-quality medical dataset from PubMed Central, containing 2.2 million…

Small and imbalanced datasets commonly seen in healthcare represent a challenge when training classifiers based on deep learning models. So motivated, we propose a novel framework based on BioBERT (Bidirectional Encoder Representations from…

Computation and Language · Computer Science 2020-06-23 Shijing Si , Rui Wang , Jedrek Wosik , Hao Zhang , David Dov , Guoyin Wang , Ricardo Henao , Lawrence Carin

Objective: To comparatively evaluate several transformer model architectures at identifying protected health information (PHI) in the i2b2/UTHealth 2014 clinical text de-identification challenge corpus. Methods: The i2b2/UTHealth 2014…

Computation and Language · Computer Science 2022-04-15 Christopher Meaney , Wali Hakimpour , Sumeet Kalia , Rahim Moineddin

A connectional brain template (CBT) is a holistic representation of a population of multi-view brain connectivity graphs, encoding shared patterns and normalizing typical variations across individuals. The federation of CBT learning allows…

Computer Vision and Pattern Recognition · Computer Science 2024-03-15 Geng Chen , Qingyue Wang , Islem Rekik