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An algorithm is presented that constructs an acyclic partial matching on the cells of a given simplicial complex from a vector-valued function defined on the vertices and extended to each simplex by taking the least common upper bound of…

Computational Geometry · Computer Science 2017-03-24 Madjid Allili , Tomasz Kaczynski , Claudia Landi , Filippo Masoni

The theory of persistence modules on the commutative ladders $CL_n(\tau)$ provides an extension of persistent homology. However, an efficient algorithm to compute the generalized persistence diagrams is still lacking. In this work, we view…

Representation Theory · Mathematics 2018-09-26 Hideto Asashiba , Emerson G. Escolar , Yasuaki Hiraoka , Hiroshi Takeuchi

This article introduces an algorithm to compute the persistent homology of a filtered complex with various coefficient fields in a single matrix reduction. The algorithm is output-sensitive in the total number of distinct persistent…

Computational Geometry · Computer Science 2020-01-10 Jean-Daniel Boissonnat , Clément Maria

Topological data analysis can extract effective information from higher-dimensional data. Its mathematical basis is persistent homology. The persistent homology can calculate topological features at different spatiotemporal scales of the…

Algebraic Topology · Mathematics 2023-09-29 Dinghua Shi , Zhifeng Chen , Chuang Ma , Guanrong Chen

Although there is no doubt that multi-parameter persistent homology is a useful tool to analyse multi-variate data, efficient ways to compute these modules are still lacking in the available topological data analysis toolboxes. Other issues…

Algebraic Topology · Mathematics 2021-04-15 Asilata Bapat , Robyn Brooks , Celia Hacker , Claudia Landi , Barbara I. Mahler

The Morse-Smale complex is a standard tool in visual data analysis. The classic definition is based on a continuous view of the gradient of a scalar function where its zeros are the critical points. These points are connected via gradient…

Computational Geometry · Computer Science 2024-09-10 Son Le Thanh , Michael Ankele , Tino Weinkauf

We introduce two tools, dynamical thickening and flow selectors, to overcome the infamous discontinuity of the gradient flow endpoint map near non-degenerate critical points. More precisely, we interpret the stable fibrations of certain…

Dynamical Systems · Mathematics 2016-07-04 Joa Weber

We provide a naturally isomorphic description of the persistence map from merge trees to barcodes in terms of a monotone map from the partition lattice to the subset lattice. Our description is local, which offers the potential to speed up…

Algebraic Topology · Mathematics 2022-03-02 Brendan Mallery , Adélie Garin , Justin Curry

We study the categorical framework for the computation of persistent homology, without reliance on a particular computational algorithm. The computation of persistent homology is commonly summarized as a matrix theorem, which we call the…

Algebraic Topology · Mathematics 2018-10-02 Killian Meehan , Andrei Pavlichenko , Jan Segert

We construct a Floer type boundary operator for generalised Morse-Smale dynamical systems on compact smooth manifolds by counting the number of suitable flow lines between closed (both homoclinic and periodic) orbits and isolated critical…

Dynamical Systems · Mathematics 2024-12-10 Marzieh Eidi , Jürgen Jost

Persistent homology is a popular and powerful tool for capturing topological features of data. Advances in algorithms for computing persistent homology have reduced the computation time drastically -- as long as the algorithm does not…

Computational Geometry · Computer Science 2013-10-03 Ulrich Bauer , Michael Kerber , Jan Reininghaus

We introduce combinatorial multivector fields, associate with them multivalued dynamics and study their topological features. Our combinatorial multivector fields generalize combinatorial vector fields of Forman. We define isolated…

Dynamical Systems · Mathematics 2016-05-24 Marian Mrozek

A matrix-compression algorithm is derived from a novel isogenic block decomposition for square matrices. The resulting compression and inflation operations possess strong functorial and spectral-permanence properties. The basic observation…

Rings and Algebras · Mathematics 2022-11-01 Alexander Belton , Dominique Guillot , Apoorva Khare , Mihai Putinar

Persistence diagrams, combining geometry and topology for an effective shape description used in pattern recognition, have already proven to be an effective tool for shape representation with respect to a certainfiltering function.…

Algebraic Topology · Mathematics 2018-12-26 Alessia Angeli , Massimo Ferri , Ivan Tomba

Understanding feature-outcome associations in high-dimensional data remains challenging when relationships vary across subpopulations, yet standard methods assuming global associations miss context-dependent patterns, reducing statistical…

Methodology · Statistics 2025-11-20 Pawel Gajer , Jacques Ravel

Persistent homology is a popular data analysis technique that is used to capture the changing topology of a filtration associated with some simplicial complex $K$. These topological changes are summarized in persistence diagrams. We propose…

Computational Geometry · Computer Science 2018-10-11 Tamal K. Dey , Ryan Slechta

Recovering hidden graph-like structures from potentially noisy data is a fundamental task in modern data analysis. Recently, a persistence-guided discrete Morse-based framework to extract a geometric graph from low-dimensional data has…

Computational Geometry · Computer Science 2018-03-22 Tamal K. Dey , Jiayuan Wang , Yusu Wang

We call a continuous self-map that reveals itself through a discrete set of point-value pairs a sampled dynamical system. Capturing the available information with chain maps on Delaunay complexes, we use persistent homology to quantify the…

Algebraic Topology · Mathematics 2021-07-27 Ulrich Bauer , Herbert Edelsbrunner , Grzegorz Jablonski , Marian Mrozek

Topological data analysis can reveal higher-order structure beyond pairwise connections between vertices in complex networks. We present a new method based on discrete Morse theory to study topological properties of unweighted and…

Discrete Mathematics · Computer Science 2019-10-01 Harish Kannan , Emil Saucan , Indrava Roy , Areejit Samal

The long computational time and large memory requirements for computing Vietoris Rips persistent homology from point clouds remains a significant deterrent to its application to big data. This paper aims to reduce the memory footprint of…

Algebraic Topology · Mathematics 2024-12-12 Musashi Ayrton Koyama , Vanessa Robins , Katharine Turner