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Existing Python libraries and tools lack the ability to efficiently compute statistical test results for large datasets in the presence of missing values. This presents an issue as soon as constraints on runtime and memory availability…

Mathematical Software · Computer Science 2025-05-02 Fabian Woller , Lis Arend , Christian Fuchsberger , Markus List , David B. Blumenthal

Python is the de-facto language for software development in artificial intelligence (AI). Commonly used libraries, such as PyTorch and TensorFlow, rely on parallelization built into their BLAS backends to achieve speedup on CPUs. However,…

Machine Learning · Computer Science 2025-05-02 Maksim Helmann , Alexander Strack , Dirk Pflüger

We introduce SciWING, an open-source software toolkit which provides access to pre-trained models for scientific document processing tasks, inclusive of citation string parsing and logical structure recovery. SciWING enables researchers to…

Digital Libraries · Computer Science 2020-10-26 Abhinav Ramesh Kashyap , Min-Yen Kan

Ensembling is commonly used in machine learning on tabular data to boost predictive performance and robustness, but larger ensembles often lead to increased hardware demand. We introduce HAPEns, a post-hoc ensembling method that explicitly…

Machine Learning · Computer Science 2026-03-12 Jannis Maier , Lennart Purucker

Management and analysis of big data are systematically associated with a data distributed architecture in the Hadoop and now Spark frameworks. This article offers an introduction for statisticians to these technologies by comparing the…

Applications · Statistics 2016-10-03 Philippe Besse , Brendan Guillouet , Jean-Michel Loubes

Programming modern high-performance computing systems is challenging due to the need to efficiently program GPUs and accelerators and to handle data movement between nodes. The C++ language has been continuously enhanced in recent years…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-05-12 Biagio Cosenza , Lorenzo Carpentieri , Kaijie Fan , Marco D'Antonio , Peter Thoman , Philip Salzmann

The usage of the high-level scripting language Python has enabled new mechanisms for data interrogation, discovery and visualization of scientific data. We present yt, an open source, community-developed astrophysical analysis and…

Instrumentation and Methods for Astrophysics · Physics 2011-12-21 Matthew J. Turk , Britton D. Smith

Multi-dimensional Hawkes process (MHP) is a class of self and mutually exciting point processes that find wide range of applications -- from prediction of earthquakes to modelling of order books in high frequency trading. This paper makes…

Machine Learning · Statistics 2020-06-05 Sobin Joseph , Lekhapriya Dheeraj Kashyap , Shashi Jain

Understanding how the brain functions is one of the biggest challenges of our time. The analysis of experimentally recorded neural firing patterns (spike trains) plays a crucial role in addressing this problem. Here, the PySpike library is…

Data Analysis, Statistics and Probability · Physics 2016-07-12 Mario Mulansky , Thomas Kreuz

Theano is a Python library that allows to define, optimize, and evaluate mathematical expressions involving multi-dimensional arrays efficiently. Since its introduction, it has been one of the most used CPU and GPU mathematical compilers -…

Symbolic Computation · Computer Science 2016-05-10 The Theano Development Team , Rami Al-Rfou , Guillaume Alain , Amjad Almahairi , Christof Angermueller , Dzmitry Bahdanau , Nicolas Ballas , Frédéric Bastien , Justin Bayer , Anatoly Belikov , Alexander Belopolsky , Yoshua Bengio , Arnaud Bergeron , James Bergstra , Valentin Bisson , Josh Bleecher Snyder , Nicolas Bouchard , Nicolas Boulanger-Lewandowski , Xavier Bouthillier , Alexandre de Brébisson , Olivier Breuleux , Pierre-Luc Carrier , Kyunghyun Cho , Jan Chorowski , Paul Christiano , Tim Cooijmans , Marc-Alexandre Côté , Myriam Côté , Aaron Courville , Yann N. Dauphin , Olivier Delalleau , Julien Demouth , Guillaume Desjardins , Sander Dieleman , Laurent Dinh , Mélanie Ducoffe , Vincent Dumoulin , Samira Ebrahimi Kahou , Dumitru Erhan , Ziye Fan , Orhan Firat , Mathieu Germain , Xavier Glorot , Ian Goodfellow , Matt Graham , Caglar Gulcehre , Philippe Hamel , Iban Harlouchet , Jean-Philippe Heng , Balázs Hidasi , Sina Honari , Arjun Jain , Sébastien Jean , Kai Jia , Mikhail Korobov , Vivek Kulkarni , Alex Lamb , Pascal Lamblin , Eric Larsen , César Laurent , Sean Lee , Simon Lefrancois , Simon Lemieux , Nicholas Léonard , Zhouhan Lin , Jesse A. Livezey , Cory Lorenz , Jeremiah Lowin , Qianli Ma , Pierre-Antoine Manzagol , Olivier Mastropietro , Robert T. McGibbon , Roland Memisevic , Bart van Merriënboer , Vincent Michalski , Mehdi Mirza , Alberto Orlandi , Christopher Pal , Razvan Pascanu , Mohammad Pezeshki , Colin Raffel , Daniel Renshaw , Matthew Rocklin , Adriana Romero , Markus Roth , Peter Sadowski , John Salvatier , François Savard , Jan Schlüter , John Schulman , Gabriel Schwartz , Iulian Vlad Serban , Dmitriy Serdyuk , Samira Shabanian , Étienne Simon , Sigurd Spieckermann , S. Ramana Subramanyam , Jakub Sygnowski , Jérémie Tanguay , Gijs van Tulder , Joseph Turian , Sebastian Urban , Pascal Vincent , Francesco Visin , Harm de Vries , David Warde-Farley , Dustin J. Webb , Matthew Willson , Kelvin Xu , Lijun Xue , Li Yao , Saizheng Zhang , Ying Zhang

The HEP community is approaching an era were the excellent performances of the particle accelerators in delivering collision at high rate will force the experiments to record a large amount of information. The growing size of the datasets…

The Hawkes process and its extensions effectively model self-excitatory phenomena including earthquakes, viral pandemics, financial transactions, neural spike trains and the spread of memes through social networks. The usefulness of these…

Applications · Statistics 2020-05-21 Andrew J. Holbrook , Charles E. Loeffler , Seth R. Flaxman , Marc A. Suchard

SparseChem provides fast and accurate machine learning models for biochemical applications. Especially, the package supports very high-dimensional sparse inputs, e.g., millions of features and millions of compounds. It is possible to train…

Machine Learning · Statistics 2022-03-10 Adam Arany , Jaak Simm , Martijn Oldenhof , Yves Moreau

I present a fast Python tool, SpectRes, for carrying out the resampling of spectral flux densities and their associated uncertainties onto different wavelength grids. The function works with any grid of wavelength values, including…

Instrumentation and Methods for Astrophysics · Physics 2017-05-16 A. C. Carnall

Techniques for recording large-scale neuronal spiking activity are developing very fast. This leads to an increasing demand for algorithms capable of analyzing large amounts of experimental spike train data. One of the most crucial and…

Data Analysis, Statistics and Probability · Physics 2015-04-16 Thomas Kreuz , Mario Mulansky , Nebojsa Bozanic

This paper presents PyTSK, a Python toolbox for developing Takagi-Sugeno-Kang (TSK) fuzzy systems. Based on scikit-learn and PyTorch, PyTSK allows users to optimize TSK fuzzy systems using fuzzy clustering or mini-batch gradient descent…

Machine Learning · Computer Science 2022-06-08 Yuqi Cui , Dongrui Wu , Xue Jiang , Yifan Xu

Many modern spatio-temporal data sets, in sociology, epidemiology or seismology, for example, exhibit self-exciting characteristics, triggering and clustering behaviors both at the same time, that a suitable Hawkes space-time process can…

Machine Learning · Statistics 2024-06-18 Emilia Siviero , Guillaume Staerman , Stephan Clémençon , Thomas Moreau

This paper describes HyperStream, a large-scale, flexible and robust software package, written in the Python language, for processing streaming data with workflow creation capabilities. HyperStream overcomes the limitations of other…

Machine Learning · Computer Science 2019-08-09 Tom Diethe , Meelis Kull , Niall Twomey , Kacper Sokol , Hao Song , Miquel Perello-Nieto , Emma Tonkin , Peter Flach

Aggregate programming is a field-based coordination paradigm with over a decade of exploration and successful applications across domains including sensor networks, robotics, and IoT, with implementations in various programming languages,…

Software Engineering · Computer Science 2026-04-01 Gianluca Aguzzi , Davide Domini , Nicolas Farabegoli , Mirko Viroli

Benchmark datasets play an important role in evaluating Natural Language Understanding (NLU) models. However, shortcuts -- unwanted biases in the benchmark datasets -- can damage the effectiveness of benchmark datasets in revealing models'…

Human-Computer Interaction · Computer Science 2023-01-16 Zhihua Jin , Xingbo Wang , Furui Cheng , Chunhui Sun , Qun Liu , Huamin Qu
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