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Revealing the structural features of a complex system from the observed collective dynamics is a fundamental problem in network science. In order to compute the various topological descriptors commonly used to characterize the structure of…

Data Analysis, Statistics and Probability · Physics 2021-02-16 Sebastian Raimondo , Manlio De Domenico

Complex networks describe a wide range of systems in nature and society, much quoted examples including the cell, a network of chemicals linked by chemical reactions, or the Internet, a network of routers and computers connected by physical…

Statistical Mechanics · Physics 2016-08-31 Reka Albert , Albert-Laszlo Barabasi

Recent evidence indicates that the abundance of recurring elementary interaction patterns in complex networks, often called subgraphs or motifs, carry significant information about their function and overall organization. Yet, the…

Disordered Systems and Neural Networks · Physics 2009-11-10 A. Vazquez , R. Dobrin , D. Sergi , J. -P. Eckmann , Z. N. Oltvai , A. -L. Barabasi

Understanding community structures is crucial for analyzing networks, as nodes join communities that collectively shape large-scale networks. In real-world settings, the formation of communities is often impacted by several social factors,…

Social and Information Networks · Computer Science 2025-04-16 Elze de Vink , Frank W. Takes , Akrati Saxena

We explore the interplay between the topological relevance of a neuron and its dynamical traces in experimental cultured neuronal networks. We monitor the growth and development of these networks to characterise the evolution of their…

Adaptation and Self-Organizing Systems · Physics 2023-07-14 A. Tlaie , L. M. Ballesteros-Esteban , I. Leyva , I. Sendina-Nadal

Many methods have been developed for finding the commonalities between different organisms to study their phylogeny. The structure of metabolic networks also reveal valuable insights into metabolic capacity of species as well as into the…

Molecular Networks · Quantitative Biology 2016-04-08 Krishanu Deyasi , Anirban Banerjee , Bony Deb

In many data sets, crucial information on the structure and temporality of a system coexists with noise and non-essential elements. In networked systems, for instance, some edges might be non-essential or exist only by chance. Filtering…

Physics and Society · Physics 2019-01-16 Teruyoshi Kobayashi , Taro Takaguchi , Alain Barrat

Complex networks in natural, social, and technological systems generically exhibit an abundance of rich information. Extracting meaningful structural features from data is one of the most challenging tasks in network theory. Many methods…

Physics and Society · Physics 2012-06-04 Daniel Grady , Christian Thiemann , Dirk Brockmann

Identifying undocumented or potential future interactions among species is a challenge facing modern ecologists. Recent link prediction methods rely on trait data, however large species interaction databases are typically sparse and…

Applications · Statistics 2019-09-23 Mohamad Elmasri , Maxwell J. Farrell , T. Jonathan Davies , David A. Stephens

Several natural and theoretical networks can be broken down into smaller portions, or subgraphs corresponding to neighborhoods. The more frequent of these neighborhoods can then be understood as motifs of the network, being therefore…

Physics and Society · Physics 2022-04-21 Guilherme S. Domingues , Eric K. Tokuda , Luciano da F. Costa

Comparing weighted networks in neuroscience is hard, because the topological properties of a given network are necessarily dependent on the number of edges of that network. This problem arises in the analysis of both weighted and unweighted…

Applications · Statistics 2014-03-28 Cedric E. Ginestet , Arnaud P. Fournel , Andrew Simmons

Deviations from the average can provide valuable insights about the organization of natural systems. This article extends this important principle to the more systematic identification and analysis of singular local connectivity patterns in…

Data Analysis, Statistics and Probability · Physics 2007-05-23 Luciano da F. Costa , Marcus Kaiser , Claus Hilgetag

Many network systems are composed of interdependent but distinct types of interactions, which cannot be fully understood in isolation. These different types of interactions are often represented as layers, attributes on the edges or as a…

Physics and Society · Physics 2015-10-13 Tiago P. Peixoto

Traditional works on community detection from observations of information cascade assume that a single adjacency matrix parametrizes all the observed cascades. However, in reality the connection structure usually does not stay the same…

Machine Learning · Statistics 2019-04-11 Ming Yu , Varun Gupta , Mladen Kolar

Many real-world networks known as attributed networks contain two types of information: topology information and node attributes. It is a challenging task on how to use these two types of information to explore structural regularities. In…

Physics and Society · Physics 2019-01-28 Zhenhai Chang , Caiyan Jia , Xianjun Yin , Yimei Zheng

Data-driven analysis of complex networks has been in the focus of research for decades. An important area of research is to study how well real networks can be described with a small selection of metrics, furthermore how well network models…

Social and Information Networks · Computer Science 2022-04-28 Marcell Nagy , Roland Molontay

The discovery of community structure is a common challenge in the analysis of network data. Many methods have been proposed for finding community structure, but few have been proposed for determining whether the structure found is…

Data Analysis, Statistics and Probability · Physics 2008-04-29 Brian Karrer , Elizaveta Levina , M. E. J. Newman

Attributed network data is becoming increasingly common across fields, as we are often equipped with information about nodes in addition to their pairwise connectivity patterns. This extra information can manifest as a classification, or as…

Social and Information Networks · Computer Science 2018-05-22 Natalie Stanley , Marc Niethammer , Peter J. Mucha

Network embedding, which aims to learn low-dimensional representations of nodes, has been used for various graph related tasks including visualization, link prediction and node classification. Most existing embedding methods rely solely on…

Social and Information Networks · Computer Science 2019-08-22 Palash Goyal , Homa Hosseinmardi , Emilio Ferrara , Aram Galstyan

The topology of a sensor network changes very frequently due to node failures because of power constraints or physical destruction. Robustness to topology changes is one of the important design factors of wireless sensor networks which…

Networking and Internet Architecture · Computer Science 2021-03-31 Sateeshkrishna Dhuli , Yatindra Nath Singh