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We describe a new methodology for studying persistence of topological features across a family of spaces or point-cloud data sets, called zigzag persistence. Building on classical results about quiver representations, zigzag persistence…

Computational Geometry · Computer Science 2008-12-02 Gunnar Carlsson , Vin de Silva

Zigzag persistent homology is a powerful generalisation of persistent homology that allows one not only to compute persistence diagrams with less noise and using less memory, but also to use persistence in new fields of application.…

Computational Geometry · Computer Science 2016-08-23 Clément Maria , Steve Oudot

The theory of zigzag persistence is a substantial extension of persistent homology, and its development has enabled the investigation of several unexplored avenues in the area of topological data analysis. In this paper, we discuss three…

Computational Geometry · Computer Science 2011-08-18 Andrew Tausz , Gunnar Carlsson

Persistent homology (PH) is a recently developed theory in the field of algebraic topology to study shapes of datasets. It is an effective data analysis tool that is robust to noise and has been widely applied. We demonstrate a general…

Signal Processing · Electrical Eng. & Systems 2020-05-05 Yu-Min Chung , Chuan-Shen Hu , Yu-Lun Lo , Hau-Tieng Wu

Understanding the decision-making processes of large language models is critical given their widespread applications. To achieve this, we aim to connect a formal mathematical framework - zigzag persistence from topological data analysis -…

Computation and Language · Computer Science 2025-06-16 Yuri Gardinazzi , Karthik Viswanathan , Giada Panerai , Alessio Ansuini , Alberto Cazzaniga , Matteo Biagetti

Over the past two decades, topological data analysis has emerged as a field of applied mathematics with new applications and algorithmic developments appearing rapidly. Two fundamental computations in this field are persistent homology and…

Algebraic Topology · Mathematics 2021-03-02 Gunnar Carlsson , Anjan Dwaraknath , Bradley J. Nelson

Bifurcations in dynamical systems characterize qualitative changes in the system behavior. Therefore, their detection is important because they can signal the transition from normal system operation to imminent failure. While standard…

Computational Geometry · Computer Science 2020-11-16 Sarah Tymochko , Elizabeth Munch , Firas A. Khasawneh

This work presents a framework for studying temporal networks using zigzag persistence, a tool from the field of Topological Data Analysis (TDA). The resulting approach is general and applicable to a wide variety of time-varying graphs. For…

Computational Geometry · Computer Science 2023-08-15 Audun Myers , David Muñoz , Firas Khasawneh , Elizabeth Munch

We use topological data analysis to study neural population activity in the Sensorium 2023 dataset, which records responses from thousands of mouse visual cortex neurons to diverse video stimuli. For each video, we build frame-by-frame…

Algebraic Topology · Mathematics 2026-03-04 Yuri Gardinazzi , Alessio Ansuini , Eugenio Piasini , Fabio Anselmi , Matteo Biagetti

Topological data analysis is an emerging area in exploratory data analysis and data mining. Its main tool, persistent homology, has become a popular technique to study the structure of complex, high-dimensional data. In this paper, we…

Graphics · Computer Science 2017-10-04 Mustafa Hajij , Bei Wang , Carlos Scheidegger , Paul Rosen

This paper develops the idea of homology for 1-parameter families of topological spaces. We express parametrized homology as a collection of real intervals with each corresponding to a homological feature supported over that interval or,…

Algebraic Topology · Mathematics 2019-03-20 Gunnar Carlsson , Vin de Silva , Sara Kalisnik , Dmitriy Morozov

A method to apply and visualize persistent homology of time series is proposed. The method captures persistent features in space and time, in contrast to the existing procedures, where one usually chooses one while keeping the other fixed.…

Algebraic Topology · Mathematics 2024-12-17 Martina Flammer , Knut Hüper

Persistent homology is a powerful mathematical tool that summarizes useful information about the shape of data allowing one to detect persistent topological features while one adjusts the resolution. However, the computation of such…

Quantum Physics · Physics 2022-03-01 Bernardo Ameneyro , Vasileios Maroulas , George Siopsis

Persistent homology, a powerful mathematical tool for data analysis, summarizes the shape of data through tracking topological features across changes in different scales. Classical algorithms for persistent homology are often constrained…

Quantum Physics · Physics 2024-02-28 Bernardo Ameneyro , George Siopsis , Vasileios Maroulas

A central problem in data-driven scientific inquiry is how to interpret structure in noisy, high-dimensional data. Topological data analysis (TDA) provides a solution via persistent homology, which encodes features of interest as…

Algebraic Topology · Mathematics 2026-02-04 Christian Lentz , Gregory Henselman-Petrusek , Lori Ziegelmeier

Many multi-variate time series obtained in the natural sciences and engineering possess a repetitive behavior, as for instance state-space trajectories of industrial machines in discrete automation. Recovering the times of recurrence from…

Computational Geometry · Computer Science 2025-05-20 Simon Schindler , Elias Steffen Reich , Saverio Messineo , Simon Hoher , Stefan Huber

Recent studies have actively employed persistent homology (PH), a topological data analysis technique, to analyze the topological information in time series data. Many successful studies have utilized graph representations of time series…

Algebraic Topology · Mathematics 2025-12-15 Eunwoo Heo , Jae-Hun Jung

Algorithms for persistent homology and zigzag persistent homology are well-studied for persistence modules where homomorphisms are induced by inclusion maps. In this paper, we propose a practical algorithm for computing persistence under…

Computational Geometry · Computer Science 2014-03-26 Tamal K. Dey , Fengtao Fan , Yusu Wang

This paper contains an expository account of persistent homology and its usefulness for topological data analysis. An alternative foundation for level-set persistence is presented using sheaves and cosheaves.

Algebraic Topology · Mathematics 2015-03-05 Justin Curry

The stability theorem for persistent homology is a central result in topological data analysis. While the original formulation of the result concerns the persistence barcodes of $\mathbb{R}$-valued functions, the result was later cast in a…

Algebraic Topology · Mathematics 2018-10-24 Magnus Bakke Botnan , Michael Lesnick
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