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Active learning aims to develop label-efficient algorithms by querying the most informative samples to be labeled by an oracle. The design of efficient training methods that require fewer labels is an important research direction that…

Computer Vision and Pattern Recognition · Computer Science 2019-12-23 Ali Mottaghi , Serena Yeung

Deep neural networks achieve superior performance for learning from independent and identically distributed (i.i.d.) data. However, their performance deteriorates significantly when handling out-of-distribution (OoD) data, where the…

Machine Learning · Computer Science 2023-07-25 Haoyue Bai , Ceyuan Yang , Yinghao Xu , S. -H. Gary Chan , Bolei Zhou

Developing new fluorophores for advanced imaging techniques requires exploring new chemical space. While generative AI approaches have shown promise in designing novel dye scaffolds, prior efforts often produced synthetically intractable…

The backpropagation algorithm has promoted the rapid development of deep learning, but it relies on a large amount of labeled data and still has a large gap with how humans learn. The human brain can quickly learn various conceptual…

Neural and Evolutionary Computing · Computer Science 2023-04-25 Yiting Dong , Dongcheng Zhao , Yang Li , Yi Zeng

Fragment-based drug discovery, in which molecular fragments are assembled into new molecules with desirable biochemical properties, has achieved great success. However, many fragment-based molecule generation methods show limited…

Machine Learning · Computer Science 2024-11-20 Seul Lee , Karsten Kreis , Srimukh Prasad Veccham , Meng Liu , Danny Reidenbach , Saee Paliwal , Arash Vahdat , Weili Nie

Modern deep learning has achieved great success in various fields. However, it requires the labeling of huge amounts of data, which is expensive and labor-intensive. Active learning (AL), which identifies the most informative samples to be…

Computer Vision and Pattern Recognition · Computer Science 2022-10-18 Jae Soon Baik , In Young Yoon , Jun Won Choi

We search for new superhard B-N-O compounds with an iterative machine learning (ML) procedure, where ML models are trained using sample crystal structures from evolutionary algorithm. We first use cohesive energy to evaluate the…

Materials Science · Physics 2022-06-22 Wei-Chih Chen , Yogesh K. Vohra , Cheng-Chien Chen

The paradigm shift toward structure-driven molecule generation has been propelled by advances in deep generative models, such as variational auto-encoders and diffusion models. However, these generative models for molecular design remain…

Machine Learning · Computer Science 2026-04-17 Peidong Liu , Wenbo Zhang , Wei Ju , Jiancheng Lv , Xianggen Liu

Recent advances in deep learning led to novel generative modeling techniques that achieve unprecedented quality in generated samples and performance in learning complex distributions in imaging data. These new models in medical image…

Computer Vision and Pattern Recognition · Computer Science 2018-06-15 Xiaoran Chen , Nick Pawlowski , Martin Rajchl , Ben Glocker , Ender Konukoglu

Deep generative models have gained significant advancements to accelerate drug discovery by generating bioactive chemicals against desired targets. Nevertheless, most generated compounds that have been validated for potent bioactivity often…

Quantitative Methods · Quantitative Biology 2024-01-03 Weixin Xie , Jianhang Zhang , Qin Xie , Chaojun Gong , Youjun Xu , Luhua Lai , Jianfeng Pei

Continuous-time generative models for crystalline materials enable inverse materials design by learning to predict stable crystal structures, but incorporating explicit target properties into the generative process remains challenging.…

Machine Learning · Computer Science 2026-02-03 Philipp Hoellmer , Stefano Martiniani

Deep generative models are able to suggest new organic molecules by generating strings, trees, and graphs representing their structure. While such models allow one to generate molecules with desirable properties, they give no guarantees…

Machine Learning · Computer Science 2019-12-05 John Bradshaw , Brooks Paige , Matt J. Kusner , Marwin H. S. Segler , José Miguel Hernández-Lobato

Ensuring that Large Language Models (LLMs) generate text representative of diverse sub-populations is essential, particularly when key concepts related to under-represented groups are scarce in the training data. We address this challenge…

Computation and Language · Computer Science 2024-12-17 Sabit Hassan , Anthony Sicilia , Malihe Alikhani

Generating molecular graphs is crucial in drug design and discovery but remains challenging due to the complex interdependencies between nodes and edges. While diffusion models have demonstrated their potentiality in molecular graph design,…

Machine Learning · Computer Science 2024-11-11 Xiaoyang Hou , Tian Zhu , Milong Ren , Dongbo Bu , Xin Gao , Chunming Zhang , Shiwei Sun

Active learning selects the most informative samples to exploit limited annotation budgets. Existing work follows a cumbersome pipeline that repeats the time-consuming model training and batch data selection multiple times. In this paper,…

Computer Vision and Pattern Recognition · Computer Science 2022-03-22 Yichen Xie , Masayoshi Tomizuka , Wei Zhan

Global sensitivity analysis of complex numerical simulators is often limited by the small number of model evaluations that can be afforded. In such settings, surrogate models built from a limited set of simulations can substantially reduce…

Machine Learning · Statistics 2026-01-21 Guerlain Lambert , Céline Helbert , Claire Lauvernet

Labeled data can be expensive to acquire in several application domains, including medical imaging, robotics, and computer vision. To efficiently train machine learning models under such high labeling costs, active learning (AL) judiciously…

Machine Learning · Computer Science 2022-06-13 Konstantinos D. Polyzos , Qin Lu , Georgios B. Giannakis

Artificial Intelligence (AI)-driven material design has been attracting great attentions as a groundbreaking technology across a wide spectrum of industries. Molecular design is particularly important owing to its broad application domains…

Machine learning in drug discovery has been focused on virtual screening of molecular libraries using discriminative models. Generative models are an entirely different approach that learn to represent and optimize molecules in a continuous…

Quantitative Methods · Quantitative Biology 2020-11-17 Matthew Ragoza , Tomohide Masuda , David Ryan Koes

We developed Distilled Graph Attention Policy Network (DGAPN), a reinforcement learning model to generate novel graph-structured chemical representations that optimize user-defined objectives by efficiently navigating a physically…