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With the increasing complexity and scope of software systems, their dependability is crucial. The analysis of log data recorded during system execution can enable engineers to automatically predict failures at run time. Several Machine…

Software Engineering · Computer Science 2024-06-25 Fatemeh Hadadi , Joshua H. Dawes , Donghwan Shin , Domenico Bianculli , Lionel Briand

Accurate prediction of mortality in nasopharyngeal carcinoma (NPC), a complex malignancy particularly challenging in advanced stages, is crucial for optimizing treatment strategies and improving patient outcomes. However, this predictive…

Machine Learning · Computer Science 2024-10-25 Yejing Huo , Guoheng Huang , Lianglun Cheng , Jianbin He , Xuhang Chen , Xiaochen Yuan , Guo Zhong , Chi-Man Pun

The integration of multi-modal Magnetic Resonance Imaging (MRI) and clinical data holds great promise for enhancing the diagnosis of neurological disorders (NDs) in real-world clinical settings. Deep Learning (DL) has recently emerged as a…

Image and Video Processing · Electrical Eng. & Systems 2025-06-19 Wajih Hassan Raza , Aamir Bader Shah , Yu Wen , Yidan Shen , Juan Diego Martinez Lemus , Mya Caryn Schiess , Timothy Michael Ellmore , Renjie Hu , Xin Fu

Diffusion Language Models (DLMs) generate text by iteratively denoising masked token sequences, offering a tradeoff between parallelism and quality compared to autoregressive models. In current practice, the number of tokens decoded per…

Machine Learning · Computer Science 2026-05-20 Yufeng Xu , Zishuo Bao , Qian Wang , Zeshen Zhang , Haoqi Zhang , Bowen Peng , Ang Li , Rahul Chalamala , Yucheng Lu

The Dynamic-Mode Decomposition (DMD) is a well established data-driven method of finding temporally evolving linear-mode decompositions of nonlinear time series. Traditionally, this method presumes that all relevant dimensions are sampled…

Dynamical Systems · Mathematics 2021-01-13 Christopher W. Curtis , Daniel Jay Alford-Lago

Nuclear Magnetic Resonance (NMR) spectroscopy is a widely-used technique in the fields of bio-medicine, chemistry, and biology for the analysis of chemicals and proteins. The signals from NMR spectroscopy often have low signal-to-noise…

Signal Processing · Electrical Eng. & Systems 2024-05-21 Zihao Zou , Shirin Shoushtari , Jiaming Liu , Jialiang Zhang , Patrick Judge , Emilia Santana , Alison Lim , Marcus Foston , Ulugbek S. Kamilov

This paper introduces the N-Way Self-Evaluating Deliberation (NSED) protocol, a Runtime Mixture-of-Models (MoM) architecture that constructs emergent composite models from a plurality of distinct expert agents. Unlike traditional…

Artificial Intelligence · Computer Science 2026-01-26 Tims Pecerskis , Aivars Smirnovs

RNA function is tied to secondary structure, operating through dynamic and heterogeneous structural ensembles. While current analysis tools typically output single static structures or averaged contact maps, chemical probing methods like…

Biomolecules · Quantitative Biology 2026-05-20 Giuseppe Sacco , Jianhui Li , Redmond P. Smyth , Guido Sanguinetti , Giovanni Bussi

One-dimensional nuclear magnetic resonance (NMR) spectroscopy is essential for molecular structure elucidation in organic synthesis, drug discovery, natural product characterization, and metabolomics, yet its interpretation remains heavily…

Modal decomposition techniques, such as Empirical Mode Decomposition (EMD), Variational Mode Decomposition (VMD), and Singular Spectrum Analysis (SSA), have advanced time-frequency signal analysis since the early 21st century. These methods…

Signal Processing · Electrical Eng. & Systems 2025-10-29 Wang Hao , Kuang Zhang , Hou Chengyu , Yang Yifan , Tan Chenxing , Fu Weifeng

Biomedical research has revealed the crucial role of miRNAs in the progression of many diseases, and computational prediction methods are increasingly proposed for assisting biological experiments to verify miRNA-disease associations…

Computational Engineering, Finance, and Science · Computer Science 2023-08-29 Yi Zhou , Meixuan Wu , Chengzhou Ouyang , Min Zhu

Translating machine learning algorithms into clinical applications requires addressing challenges related to interpretability, such as accounting for the effect of confounding variables (or metadata). Confounding variables affect the…

Machine Learning · Computer Science 2022-07-12 Anthony Vento , Qingyu Zhao , Robert Paul , Kilian M. Pohl , Ehsan Adeli

Standard decoding approaches rely on model-based channel estimation methods to compensate for varying channel effects, which degrade in performance whenever there is a model mismatch. Recently proposed Deep learning based neural decoders…

Signal Processing · Electrical Eng. & Systems 2019-03-07 Yihan Jiang , Hyeji Kim , Himanshu Asnani , Sreeram Kannan

We present NNN, an experimental Transformer-based neural network approach to marketing measurement. Unlike Marketing Mix Models (MMMs) which rely on scalar inputs and parametric decay functions, NNN uses rich embeddings to capture both…

Machine Learning · Computer Science 2025-06-05 Thomas Mulc , Mike Anderson , Paul Cubre , Huikun Zhang , Ivy Liu , Saket Kumar

Inverse protein folding generates valid amino acid sequences that can fold into a desired protein structure, with recent deep-learning advances showing strong potential and competitive performance. However, challenges remain, such as…

Biomolecules · Quantitative Biology 2025-07-29 Peizhen Bai , Filip Miljković , Xianyuan Liu , Leonardo De Maria , Rebecca Croasdale-Wood , Owen Rackham , Haiping Lu

The algebraic reformulation of molecular Quantum Electrodynamics (mQED) at finite temperatures is applied to Nuclear Magnetic Resonance (NMR) in order to provide a foundation for the reconstruction of much more detailed molecular…

Quantum Physics · Physics 2020-09-25 Kolja Them

Masked diffusion models (MDMs) have achieved notable progress in modeling discrete data, while their potential in molecular generation remains underexplored. In this work, we explore their potential and introduce the surprising result that…

Machine Learning · Computer Science 2025-09-29 Hyunjin Seo , Taewon Kim , Sihyun Yu , SungSoo Ahn

Precise sensing and control of spatial mode content is essential for the performance of precision optical systems, particularly interferometric gravitational-wave detectors, where misalignment and mode mismatch can lead to significant…

Instrumentation and Methods for Astrophysics · Physics 2026-03-31 Liu Tao , Eleonora Capocasa , Yuhang Zhao , Jacques Ding , Isander Ahrend , Matteo Barsuglia

Metaphors are ubiquitous in human language. The metaphor detection task (MD) aims at detecting and interpreting metaphors from written language, which is crucial in natural language understanding (NLU) research. In this paper, we introduce…

Computation and Language · Computer Science 2021-07-29 Weicheng Ma , Ruibo Liu , Lili Wang , Soroush Vosoughi

In this paper, a mode decomposition (MD) method for degenerated modes has been studied. Convolution neural network (CNN) has been applied for image training and predicting the mode coefficients. Four-fold degenerated $LP_{11}$ series has…

Computer Vision and Pattern Recognition · Computer Science 2022-07-13 Hyuntai Kim