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Deep graph learning focuses on flexible and generalizable models that learn patterns in an automated fashion. Network science focuses on models and measures revealing the organizational principles of complex systems with explicit…

Machine Learning · Computer Science 2026-02-04 Christopher Blöcker , Martin Rosvall , Ingo Scholtes , Jevin D. West

Novel reinforcement learning algorithms, or improvements on existing ones, are commonly justified by evaluating their performance on benchmark environments and are compared to an ever-changing set of standard algorithms. However, despite…

Machine Learning · Computer Science 2024-06-25 Scott M. Jordan , Adam White , Bruno Castro da Silva , Martha White , Philip S. Thomas

We propose a novel benchmarking methodology for graph neural networks (GNNs) based on the graph alignment problem, a combinatorial optimization task that generalizes graph isomorphism by aligning two unlabeled graphs to maximize overlapping…

Machine Learning · Computer Science 2025-05-20 Adrien Lagesse , Marc Lelarge

Although Large Language Models (LLMs) have demonstrated potential in processing graphs, they struggle with comprehending graphical structure information through prompts of graph description sequences, especially as the graph size increases.…

Computation and Language · Computer Science 2024-12-17 Yukun Cao , Shuo Han , Zengyi Gao , Zezhong Ding , Xike Xie , S. Kevin Zhou

Graph learning is a popular approach for performing machine learning on graph-structured data. It has revolutionized the machine learning ability to model graph data to address downstream tasks. Its application is wide due to the…

Machine Learning · Computer Science 2022-11-07 Falih Gozi Febrinanto , Feng Xia , Kristen Moore , Chandra Thapa , Charu Aggarwal

Graph Neural Networks (GNNs) have become a central tool for learning on graph-structured data, yet their applicability to real-world systems remains limited by key challenges such as scalability, temporality, directionality, data…

Machine Learning · Computer Science 2025-10-28 Emanuele Rossi

Graph machine learning has been extensively studied in both academia and industry. However, in the literature, most existing graph machine learning models are designed to conduct training with data samples in a random order, which may…

Machine Learning · Computer Science 2024-03-14 Haoyang Li , Xin Wang , Wenwu Zhu

Research on graph representation learning has received a lot of attention in recent years since many data in real-world applications come in form of graphs. High-dimensional graph data are often in irregular form, which makes them more…

Machine Learning · Computer Science 2020-06-03 Fenxiao Chen , Yuncheng Wang , Bin Wang , C. -C. Jay Kuo

Existing approaches to solving combinatorial optimization problems on graphs suffer from the need to engineer each problem algorithmically, with practical problems recurring in many instances. The practical side of theoretical computer…

Machine Learning · Computer Science 2020-07-15 Natalia Vesselinova , Rebecca Steinert , Daniel F. Perez-Ramirez , Magnus Boman

Graphs are structured data that models complex relations between real-world entities. Heterophilic graphs, where linked nodes are prone to be with different labels or dissimilar features, have recently attracted significant attention and…

Social and Information Networks · Computer Science 2025-03-21 Chenghua Gong , Yao Cheng , Jianxiang Yu , Can Xu , Caihua Shan , Siqiang Luo , Xiang Li

Benchmarking the capabilities and limitations of large language models (LLMs) in graph-related tasks is becoming an increasingly popular and crucial area of research. Recent studies have shown that LLMs exhibit a preliminary ability to…

Machine Learning · Computer Science 2025-04-22 Xinnan Dai , Haohao Qu , Yifen Shen , Bohang Zhang , Qihao Wen , Wenqi Fan , Dongsheng Li , Jiliang Tang , Caihua Shan

Graph is an important data representation which appears in a wide diversity of real-world scenarios. Effective graph analytics provides users a deeper understanding of what is behind the data, and thus can benefit a lot of useful…

Artificial Intelligence · Computer Science 2018-02-05 Hongyun Cai , Vincent W. Zheng , Kevin Chen-Chuan Chang

Mining graph data has become a popular research topic in computer science and has been widely studied in both academia and industry given the increasing amount of network data in the recent years. However, the huge amount of network data…

Machine Learning · Computer Science 2020-01-03 Wenwu Zhu , Xin Wang , Peng Cui

Graph embedding is the task of representing nodes of a graph in a low-dimensional space and its applications for graph tasks have gained significant traction in academia and industry. The primary difference among the many recently proposed…

Social and Information Networks · Computer Science 2019-08-28 Palash Goyal , Di Huang , Ankita Goswami , Sujit Rokka Chhetri , Arquimedes Canedo , Emilio Ferrara

Machine learning, particularly graph learning, is gaining increasing recognition for its transformative impact across various fields. One such promising application is in the realm of molecule design and discovery, notably within the…

Machine Learning · Computer Science 2024-01-10 Nianzu Yang , Huaijin Wu , Kaipeng Zeng , Yang Li , Junchi Yan

With the rapid development of biomedical software and hardware, a large amount of relational data interlinking genes, proteins, chemical components, drugs, diseases, and symptoms has been collected for modern biomedical research. Many…

Artificial Intelligence · Computer Science 2021-01-21 Yankai Chen , Yaozu Wu , Shicheng Ma , Irwin King

Despite remarkable success in diverse web-based applications, Graph Neural Networks(GNNs) inherit and further exacerbate historical discrimination and social stereotypes, which critically hinder their deployments in high-stake domains such…

Machine Learning · Computer Science 2025-01-28 Ying Song , Balaji Palanisamy

Graph Neural Networks (GNNs) have demonstrated remarkable efficacy in handling graph-structured data; however, they exhibit failures after deployment, which can cause severe consequences. Hence, conducting thorough testing before deployment…

Software Engineering · Computer Science 2025-12-23 Lichen Yang , Qiang Wang , Zhonghao Yang , Daojing He , Yu Li

Graphs provide a unified representation of semantic content and relational structure, making them a natural fit for domains such as molecular modeling, citation networks, and social graphs. Meanwhile, large language models (LLMs) have…

Machine Learning · Computer Science 2026-05-04 Haotian Xu , Yuning You , Tengfei Ma

Graph neural networks (GNNs) are powerful tools for learning from graph-structured data but often produce biased predictions with respect to sensitive attributes. Fairness-aware GNNs have been actively studied for mitigating biased…

Machine Learning · Computer Science 2025-10-22 Yuya Sasaki
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