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Semantic segmentation of microscopy images is a critical task for high-throughput materials characterisation, yet its automation is severely constrained by the prohibitive cost, subjectivity, and scarcity of expert-annotated data. While…

Computer Vision and Pattern Recognition · Computer Science 2026-02-03 Salma Zahran , Zhou Ao , Zhengyang Zhang , Chen Chi , Chenchen Yuan , Yanming Wang

Synthesizing medical images while preserving their structural information is crucial in medical research. In such scenarios, the preservation of anatomical content becomes especially important. Although recent advances have been made by…

Image and Video Processing · Electrical Eng. & Systems 2024-11-14 Ziqi Yu , Botao Zhao , Shengjie Zhang , Xiang Chen , Jianfeng Feng , Tingying Peng , Xiao-Yong Zhang

High-resolution remote sensing images contain densely distributed objects with pronounced scale variations and complex boundaries, which impose higher demands on both the geometric localization and semantic prediction capabilities of…

Computer Vision and Pattern Recognition · Computer Science 2026-04-21 Jianzheng Wang , Huan Ni

Automated cell segmentation is crucial for various biological and medical applications, facilitating tasks like cell counting, morphology analysis, and drug discovery. However, manual segmentation is time-consuming and prone to…

Machine Learning · Computer Science 2024-09-13 Aaron Rock Menezes , Bharath Ramsundar

Accurate delineation of individual cells in microscopy videos is essential for studying cellular dynamics, yet separating touching or overlapping instances remains a persistent challenge. Although foundation-model for segmentation such as…

Computer Vision and Pattern Recognition · Computer Science 2026-03-24 Thomas Mendelson , Joshua Francois , Galit Lahav , Tammy Riklin-Raviv

Pre-trained diffusion models have demonstrated remarkable proficiency in synthesizing images across a wide range of scenarios with customizable prompts, indicating their effective capacity to capture universal features. Motivated by this,…

Computer Vision and Pattern Recognition · Computer Science 2024-11-22 Yuxiang Ji , Boyong He , Chenyuan Qu , Zhuoyue Tan , Chuan Qin , Liaoni Wu

Multicolor in situ hybridization (mFISH) is a karyotyping technique used to detect major chromosomal alterations using fluorescent probes and imaging techniques. Manual interpretation of mFISH images is a time consuming step that can be…

Computer Vision and Pattern Recognition · Computer Science 2018-05-04 Esteban Pardo , José Mário T Morgado , Norberto Malpica

Semantic segmentation of microscopy cell images by deep learning is a significant technique. We considered that the Transformers, which have recently outperformed CNNs in image recognition, could also be improved and developed for cell…

Computer Vision and Pattern Recognition · Computer Science 2026-04-29 Hinako Mitsuoka , Kazuhiro Hotta

Wound image segmentation is a critical component for the clinical diagnosis and in-time treatment of wounds. Recently, deep learning has become the mainstream methodology for wound image segmentation. However, the pre-processing of the…

Image and Video Processing · Electrical Eng. & Systems 2022-07-13 Honghui Liu , Changjian Wang , Kele Xu , Fangzhao Li , Ming Feng , Yuxing Peng , Hongjun He

Spatial transcriptomics (ST) technologies not only offer an unprecedented opportunity to interrogate intact biological samples in a spatially informed manner, but also set the stage for integration with other imaging-based modalities.…

Quantitative Methods · Quantitative Biology 2025-07-31 Levin M Moser , Ahmad Kamal Hamid , Esteban Miglietta , Nodar Gogoberidze , Beth A Cimini

Few-shot semantic segmentation (FSS) offers immense potential in the field of medical image analysis, enabling accurate object segmentation with limited training data. However, existing FSS techniques heavily rely on annotated semantic…

Computer Vision and Pattern Recognition · Computer Science 2023-07-28 Sanaz Karimijafarbigloo , Reza Azad , Dorit Merhof

Medical Hyperspectral Imaging (MHSI) has emerged as a promising tool for enhanced disease diagnosis, particularly in computational pathology, offering rich spectral information that aids in identifying subtle biochemical properties of…

Computer Vision and Pattern Recognition · Computer Science 2025-07-10 Qing Zhang , Guoquan Pei , Yan Wang

A novel multi-focus image fusion algorithm performed in spatial domain based on similarity characteristics is proposed incorporating with region segmentation. In this paper, a new similarity measure is developed based on the structural…

Computer Vision and Pattern Recognition · Computer Science 2022-02-01 Ya-Qiong Zhang , Xiao-Jun Wu , Hui Li

Retinal image segmentation plays an important role in automatic disease diagnosis. This task is very challenging because the complex structure and texture information are mixed in a retinal image, and distinguishing the information is…

Image and Video Processing · Electrical Eng. & Systems 2020-08-04 Shihao Zhang , Huazhu Fu , Yanwu Xu , Yanxia Liu , Mingkui Tan

Foundation models have rapidly evolved and have achieved significant accomplishments in computer vision tasks. Specifically, the prompt mechanism conveniently allows users to integrate image prior information into the model, making it…

Computer Vision and Pattern Recognition · Computer Science 2024-04-12 Handi Deng , Yucheng Zhou , Jiaxuan Xiang , Liujie Gu , Yan Luo , Hai Feng , Mingyuan Liu , Cheng Ma

We propose a software platform that integrates methods and tools for multi-objective parameter auto- tuning in tissue image segmentation workflows. The goal of our work is to provide an approach for improving the accuracy of nucleus/cell…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-10-09 Luis F. R. Taveira , Tahsin Kurc , Alba C. M. A. Melo , Jun Kong , Erich Bremer , Joel H. Saltz , George Teodoro

We present an efficient approach of Finite Element Method (FEM)-based nonrigid image registration, in which the spatial transformation is constructed using truncated hierarchical B-splines (THB-splines). The image registration framework…

Numerical Analysis · Mathematics 2017-03-20 Aishwarya Pawar , Yongjie Zhanga , Yue Jia , Xiaodong Wei , Timon Rabczuk , Chiu Ling Chan , Cosmin Anitescu

Radio Frequency Interference (RFI) poses a significant challenge in radio astronomy, arising from terrestrial and celestial sources, disrupting observations conducted by radio telescopes. Addressing RFI involves intricate heuristic…

Neural and Evolutionary Computing · Computer Science 2024-12-09 Nicholas J. Pritchard , Andreas Wicenec , Mohammed Bennamoun , Richard Dodson

Whole Slide Images (WSIs) provide exceptional detail for studying tissue architecture at the cell level. To study tumour microenvironment (TME) with the context of various protein biomarkers and cell sub-types, analysis and registration of…

Computer Vision and Pattern Recognition · Computer Science 2024-04-29 Adith Jeyasangar , Abdullah Alsalemi , Shan E Ahmed Raza

Pathology foundation models learn morphological representations through self-supervised pretraining on large-scale whole-slide images, yet they do not explicitly capture the underlying molecular state of the tissue. Spatial transcriptomics…

Computer Vision and Pattern Recognition · Computer Science 2026-03-10 Minsoo Lee , Jonghyun Kim , Juseung Yun , Sunwoo Yu , Jongseong Jang