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Medical image segmentation typically necessitates a large and precisely annotated dataset. However, obtaining pixel-wise annotation is a labor-intensive task that requires significant effort from domain experts, making it challenging to…

Computer Vision and Pattern Recognition · Computer Science 2023-08-01 Heng Cai , Lei Qi , Qian Yu , Yinghuan Shi , Yang Gao

Automated segmentation of the blood vessels in 3D volumes is an essential step for the quantitative diagnosis and treatment of many vascular diseases. 3D vessel segmentation is being actively investigated in existing works, mostly in deep…

This paper introduces a network for volumetric segmentation that learns from sparsely annotated volumetric images. We outline two attractive use cases of this method: (1) In a semi-automated setup, the user annotates some slices in the…

Computer Vision and Pattern Recognition · Computer Science 2016-06-22 Özgün Çiçek , Ahmed Abdulkadir , Soeren S. Lienkamp , Thomas Brox , Olaf Ronneberger

Medical image analysis faces significant challenges due to limited annotation data, particularly in three-dimensional carotid artery segmentation tasks, where existing datasets exhibit spatially discontinuous slice annotations with only a…

Computer Vision and Pattern Recognition · Computer Science 2025-04-02 Haoxuan Li , Wei Song , Aofan Liu , Peiwu Qin

3D image segmentation is one of the most important and ubiquitous problems in medical image processing. It provides detailed quantitative analysis for accurate disease diagnosis, abnormal detection, and classification. Currently deep…

Computer Vision and Pattern Recognition · Computer Science 2019-06-19 Zhenxi Zhang , Jie Li , Zhusi Zhong , Zhicheng Jiao , Xinbo Gao

Carotid vessel wall segmentation is a crucial yet challenging task in the computer-aided diagnosis of atherosclerosis. Although numerous deep learning models have achieved remarkable success in many medical image segmentation tasks,…

Image and Video Processing · Electrical Eng. & Systems 2022-08-30 Shishuai Hu , Zehui Liao , Yong Xia

Recent trends in semi-supervised learning have significantly boosted the performance of 3D semi-supervised medical image segmentation. Compared with 2D images, 3D medical volumes involve information from different directions, e.g.,…

Computer Vision and Pattern Recognition · Computer Science 2023-03-24 Heng Cai , Shumeng Li , Lei Qi , Qian Yu , Yinghuan Shi , Yang Gao

Delineating 3D blood vessels is essential for clinical diagnosis and treatment, however, is challenging due to complex structure variations and varied imaging conditions. Supervised deep learning has demonstrated its superior capacity in…

Image and Video Processing · Electrical Eng. & Systems 2023-02-08 Huai Chen , Xiuying Wang , Lisheng Wang

Intra-operative ultrasound is an increasingly important imaging modality in neurosurgery. However, manual interaction with imaging data during the procedures, for example to select landmarks or perform segmentation, is difficult and can be…

Computer Vision and Pattern Recognition · Computer Science 2019-04-19 Julia Rackerseder , Rüdiger Göbl , Nassir Navab , Christoph Hennersperger

One of the main obstacles to 3D semantic segmentation is the significant amount of endeavor required to generate expensive point-wise annotations for fully supervised training. To alleviate manual efforts, we propose GIDSeg, a novel…

Computer Vision and Pattern Recognition · Computer Science 2021-06-08 Peng Yin , Lingyun Xu , Jianmin Ji , Sebastian Scherer , Howie Choset

Deep learning techniques for 3D brain vessel image segmentation have not been as successful as in the segmentation of other organs and tissues. This can be explained by two factors. First, deep learning techniques tend to show poor…

Computer Vision and Pattern Recognition · Computer Science 2021-11-04 Vien Ngoc Dang , Francesco Galati , Rosa Cortese , Giuseppe Di Giacomo , Viola Marconetto , Prateek Mathur , Karim Lekadir , Marco Lorenzi , Ferran Prados , Maria A. Zuluaga

The objective of this study is the segmentation of the intima-media complex of the common carotid artery, on longitudinal ultrasound images, to measure its thickness. We propose a fully automatic region-based segmentation method, involving…

Image and Video Processing · Electrical Eng. & Systems 2022-01-31 Nolann Lainé , Guillaume Zahnd , Herv é Liebgott , Maciej Orkisz

Despite that deep learning has achieved state-of-the-art performance for medical image segmentation, its success relies on a large set of manually annotated images for training that are expensive to acquire. In this paper, we propose an…

Image and Video Processing · Electrical Eng. & Systems 2021-01-01 Lu Wang , Dong Guo , Guotai Wang , Shaoting Zhang

Brain MR image segmentation is a key task in neuroimaging studies. It is commonly conducted using standard computational tools, such as FSL, SPM, multi-atlas segmentation etc, which are often registration-based and suffer from expensive…

Image and Video Processing · Electrical Eng. & Systems 2019-08-29 Chengliang Dai , Yuanhan Mo , Elsa Angelini , Yike Guo , Wenjia Bai

The segmentation of coronary arteries in X-ray angiograms by convolutional neural networks (CNNs) is promising yet limited by the requirement of precisely annotating all pixels in a large number of training images, which is extremely…

Computer Vision and Pattern Recognition · Computer Science 2020-08-19 Jingyang Zhang , Guotai Wang , Hongzhi Xie , Shuyang Zhang , Ning Huang , Shaoting Zhang , Lixu Gu

Since the preparation of labeled data for training semantic segmentation networks of point clouds is a time-consuming process, weakly supervised approaches have been introduced to learn from only a small fraction of data. These methods are…

Computer Vision and Pattern Recognition · Computer Science 2022-09-16 Gengxin Liu , Oliver van Kaick , Hui Huang , Ruizhen Hu

The success of Convolutional Neural Networks (CNNs) in 3D medical image segmentation relies on massive fully annotated 3D volumes for training that are time-consuming and labor-intensive to acquire. In this paper, we propose to annotate a…

Computer Vision and Pattern Recognition · Computer Science 2023-02-14 Shuwei Zhai , Guotai Wang , Xiangde Luo , Qiang Yue , Kang Li , Shaoting Zhang

Vascular structure segmentation plays a crucial role in medical analysis and clinical applications. The practical adoption of fully supervised segmentation models is impeded by the intricacy and time-consuming nature of annotating vessels…

Computer Vision and Pattern Recognition · Computer Science 2024-02-20 Zhanqiang Guo , Zimeng Tan , Jianjiang Feng , Jie Zhou

As deep learning methods continue to improve medical image segmentation performance, data annotation is still a big bottleneck due to the labor-intensive and time-consuming burden on medical experts, especially for 3D images. To…

Computer Vision and Pattern Recognition · Computer Science 2023-09-26 Yixuan Wu , Bo Zheng , Jintai Chen , Danny Z. Chen , Jian Wu

Instance segmentation in 3D images is a fundamental task in biomedical image analysis. While deep learning models often work well for 2D instance segmentation, 3D instance segmentation still faces critical challenges, such as insufficient…

Computer Vision and Pattern Recognition · Computer Science 2018-07-02 Zhuo Zhao , Lin Yang , Hao Zheng , Ian H. Guldner , Siyuan Zhang , Danny Z. Chen
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