English
Related papers

Related papers: E2CB2former: Effecitve and Explainable Transformer…

200 papers

Developing interpretable models for neurodevelopmental disorders (NDDs) diagnosis presents significant challenges in effectively encoding, decoding, and integrating multimodal neuroimaging data. While many existing machine learning…

Computer Vision and Pattern Recognition · Computer Science 2026-04-24 Yueyang Li , Lei Chen , Wenhao Dong , Shengyu Gong , Zijian Kang , Boyang Wei , Weiming Zeng , Hongjie Yan , Lingbin Bian , Zhiguo Zhang , Wai Ting Siok , Nizhuan Wang

Predicting response to neoadjuvant therapy is a vexing challenge in breast cancer. In this study, we evaluate the ability of deep learning to predict response to HER2-targeted neo-adjuvant chemotherapy (NAC) from pre-treatment dynamic…

Human activity intensity prediction is crucial to many location-based services. Despite tremendous progress in modeling dynamics of human activity, most existing methods overlook physical constraints of spatial interaction, leading to…

Machine Learning · Computer Science 2025-10-27 Yi Wang , Zhenghong Wang , Fan Zhang , Chaogui Kang , Sijie Ruan , Di Zhu , Chengling Tang , Zhongfu Ma , Weiyu Zhang , Yu Zheng , Philip S. Yu , Yu Liu

A major goal of neuroscience is to understand brain computations during visual processing in naturalistic settings. A dominant approach is to use image-computable deep neural networks trained with different task objectives as a basis for…

Neurons and Cognition · Quantitative Biology 2026-02-06 Hossein Adeli , Sun Minni , Nikolaus Kriegeskorte

Convolution neural networks (CNNs) have succeeded in compressive image sensing. However, due to the inductive bias of locality and weight sharing, the convolution operations demonstrate the intrinsic limitations in modeling the long-range…

Image and Video Processing · Electrical Eng. & Systems 2022-01-03 Dongjie Ye , Zhangkai Ni , Hanli Wang , Jian Zhang , Shiqi Wang , Sam Kwong

Deep learning methods based on Convolutional Neural Networks (CNNs) have shown great potential to improve early and accurate diagnosis of Alzheimer's disease (AD) dementia based on imaging data. However, these methods have yet to be widely…

Computer Vision and Pattern Recognition · Computer Science 2025-01-22 Wenjie Kang , Lize Jiskoot , Peter De Deyn , Geert Biessels , Huiberdina Koek , Jurgen Claassen , Huub Middelkoop , Wiesje Flier , Willemijn J. Jansen , Stefan Klein , Esther Bron

Deep learning has become a powerful tool for medical image analysis; however, conventional Convolutional Neural Networks (CNNs) often fail to capture the fine-grained and complex features critical for accurate diagnosis. To address this…

Computer Vision and Pattern Recognition · Computer Science 2025-09-09 Zahid Ullah , Minki Hong , Tahir Mahmood , Jihie Kim

The blood-brain barrier (BBB) serves as a protective barrier that separates the brain from the circulatory system, regulating the passage of substances into the central nervous system. Assessing the BBB permeability of potential drugs is…

Quantitative Methods · Quantitative Biology 2024-09-10 Shivesh Prakash

Accurate prediction of protein-ligand binding affinities is an essential challenge in structure-based drug design. Despite recent advances in data-driven methods for affinity prediction, their accuracy is still limited, partially because…

Biomolecules · Quantitative Biology 2024-09-04 Yaosen Min , Ye Wei , Peizhuo Wang , Xiaoting Wang , Han Li , Nian Wu , Stefan Bauer , Shuxin Zheng , Yu Shi , Yingheng Wang , Ji Wu , Dan Zhao , Jianyang Zeng

Building AI models with trustworthiness is important especially in regulated areas such as healthcare. In tackling COVID-19, previous work uses convolutional neural networks as the backbone architecture, which has shown to be prone to…

Image and Video Processing · Electrical Eng. & Systems 2022-07-20 Kai Ma , Pengcheng Xi , Karim Habashy , Ashkan Ebadi , Stéphane Tremblay , Alexander Wong

Graph neural networks (GNNs) demonstrate great performance in compound property and activity prediction due to their capability to efficiently learn complex molecular graph structures. However, two main limitations persist including…

Biomolecules · Quantitative Biology 2023-10-10 Apakorn Kengkanna , Masahito Ohue

Predictive business process monitoring focuses on predicting future characteristics of a running process using event logs. The foresight into process execution promises great potentials for efficient operations, better resource management,…

Machine Learning · Computer Science 2021-04-05 Zaharah A. Bukhsh , Aaqib Saeed , Remco M. Dijkman

The Transformer is a highly successful deep learning model that has revolutionised the world of artificial neural networks, first in natural language processing and later in computer vision. This model is based on the attention mechanism…

Machine Learning · Computer Science 2023-05-09 Riccardo Ughi , Eugenio Lomurno , Matteo Matteucci

Predicting signed interactions in biological networks is crucial for understanding drug mechanisms and facilitating drug repurposing. While deep graph models have demonstrated success in modeling complex biological systems, existing…

Machine Learning · Computer Science 2025-03-19 Shuyi Jin , Mengji Zhang , Meijie Wang , Lun Yu

Modern top-performing object detectors depend heavily on backbone networks, whose advances bring consistent performance gains through exploring more effective network structures. In this paper, we propose a novel and flexible backbone…

Computer Vision and Pattern Recognition · Computer Science 2022-11-23 Tingting Liang , Xiaojie Chu , Yudong Liu , Yongtao Wang , Zhi Tang , Wei Chu , Jingdong Chen , Haibin Ling

Transfer learning enhances the training of novel sensory and decision models by employing rich feature representations from large, pre-trained teacher models. Cognitive neuroscience shows that the human brain creates low-dimensional,…

Recently, radical progress in machine learning (ML) has revolutionized computational materials science, enabling unprecedentedly rapid materials discovery and property prediction, but the quantum many-body problem -- which is the key to…

Materials Science · Physics 2025-07-09 Bowen Hou , Xian Xu , Jinyuan Wu , Diana Y. Qiu

\textit{Attention} computes the dependency between representations, and it encourages the model to focus on the important selective features. Attention-based models, such as Transformer and graph attention network (GAT), are widely utilized…

Machine Learning · Computer Science 2021-03-02 Kyungwoo Song , Yohan Jung , Dongjun Kim , Il-Chul Moon

Signed Graph Neural Networks (SGNNs) have been shown to be effective in analyzing complex patterns in real-world situations where positive and negative links coexist. However, SGNN models suffer from poor explainability, which limit their…

Machine Learning · Computer Science 2024-12-13 Lu Li , Jiale Liu , Xingyu Ji , Maojun Wang , Zeyu Zhang

Predicting the behaviors of other agents on the road is critical for autonomous driving to ensure safety and efficiency. However, the challenging part is how to represent the social interactions between agents and output different possible…

Robotics · Computer Science 2021-09-15 Zhiyu Huang , Xiaoyu Mo , Chen Lv