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Sparse Autoencoders (SAEs) can efficiently identify candidate monosemantic features from pretrained neural networks for galaxy morphology. We demonstrate this on Euclid Q1 images using both supervised (Zoobot) and new self-supervised (MAE)…

Instrumentation and Methods for Astrophysics · Physics 2025-11-13 John F. Wu , Michael Walmsley

Protein language models (PLMs) have demonstrated remarkable success in protein modeling and design, yet their internal mechanisms for predicting structure and function remain poorly understood. Here we present a systematic approach to…

Biomolecules · Quantitative Biology 2024-12-18 Elana Simon , James Zou

This paper introduces an efficient and robust method for discovering interpretable circuits in large language models using discrete sparse autoencoders. Our approach addresses key limitations of existing techniques, namely computational…

Computation and Language · Computer Science 2024-05-22 Charles O'Neill , Thang Bui

Sparse autoencoders (SAEs) model the activations of a neural network as linear combinations of sparsely occurring directions of variation (latents). The ability of SAEs to reconstruct activations follows scaling laws w.r.t. the number of…

Machine Learning · Computer Science 2025-09-05 Eric J. Michaud , Liv Gorton , Tom McGrath

Large Language Models (LLMs) remain vulnerable to optimization-based jailbreak attacks that exploit internal gradient structure. While Sparse Autoencoders (SAEs) are widely used for interpretability, their robustness implications remain…

Machine Learning · Computer Science 2026-04-22 Ahson Saiyed , Sabrina Sadiekh , Chirag Agarwal

Sparse autoencoders (SAEs) have received considerable recent attention as tools for mechanistic interpretability, showing success at extracting interpretable features even from very large LLMs. However, this research has been largely…

Machine Learning · Computer Science 2025-05-20 Jeremy Budd , Javier Ideami , Benjamin Macdowall Rynne , Keith Duggar , Randall Balestriero

Large language models (LLMs) have achieved remarkable progress, yet their internal mechanisms remain largely opaque, posing a significant challenge to their safe and reliable deployment. Sparse autoencoders (SAEs) have emerged as a…

Computation and Language · Computer Science 2026-02-11 Jiaojiao Han , Wujiang Xu , Mingyu Jin , Mengnan Du

Vision-language models encode images and text in a joint space, minimizing the distance between corresponding image and text pairs. How are language and images organized in this joint space, and how do the models encode meaning and…

Computer Vision and Pattern Recognition · Computer Science 2025-08-25 Isabel Papadimitriou , Huangyuan Su , Thomas Fel , Sham Kakade , Stephanie Gil

Sparse autoencoders (SAEs) enable interpretability research by decomposing entangled model activations into monosemantic features. However, under what circumstances SAEs derive most fine-grained latent features for safety, a low-frequency…

Machine Learning · Computer Science 2026-04-15 Jiaqi Weng , Han Zheng , Hanyu Zhang , Ej Zhou , Qinqin He , Jialing Tao , Hui Xue , Zhixuan Chu , Xiting Wang

Motivated by the hypothesis that neural network representations encode abstract, interpretable features as linearly accessible, approximately orthogonal directions, sparse autoencoders (SAEs) have become a popular tool in interpretability.…

Machine Learning · Computer Science 2025-11-05 Valérie Costa , Thomas Fel , Ekdeep Singh Lubana , Bahareh Tolooshams , Demba Ba

Sparse Autoencoders (SAEs) are powerful tools for interpreting neural representations, yet their use in audio remains underexplored. We train SAEs across all encoder layers of Whisper and HuBERT, provide an extensive evaluation of their…

Sparse autoencoders (SAEs) are a popular technique for interpreting language model activations, and there is extensive recent work on improving SAE effectiveness. However, most prior work evaluates progress using unsupervised proxy metrics…

The general-purpose nature of Large Language Models (LLMs) presents a significant challenge for domain-specific applications, often leading to out-of-domain (OOD) interactions that undermine the provider's intent. Existing methods for…

Artificial Intelligence · Computer Science 2026-05-13 Elias Shaheen , Avi Mendelson

Variational Autoencoders (VAEs) are powerful generative models for learning latent representations. Standard VAEs generate dispersed and unstructured latent spaces by utilizing all dimensions, which limits their interpretability, especially…

Computer Vision and Pattern Recognition · Computer Science 2025-05-21 Farshad Sangari Abiz , Reshad Hosseini , Babak N. Araabi

Autoencoders have been used for finding interpretable and disentangled features underlying neural network representations in both image and text domains. While the efficacy and pitfalls of such methods are well-studied in vision, there is a…

Machine Learning · Computer Science 2025-02-06 Abhinav Menon , Manish Shrivastava , David Krueger , Ekdeep Singh Lubana

Sparse autoencoders (SAEs) are widely used to extract sparse, interpretable latents from transformer activations. We test whether commonly used SAE quality metrics and automatic explanation pipelines can distinguish trained transformers…

Machine Learning · Computer Science 2026-01-28 Thomas Heap , Tim Lawson , Lucy Farnik , Laurence Aitchison

Sparse autoencoders (SAEs) are widely used for interpreting language model activations. A key evaluation metric is the increase in cross-entropy loss between the original model logits and the reconstructed model logits when replacing model…

Machine Learning · Computer Science 2025-04-01 Adam Karvonen

Large language models (LLMs) can store a significant amount of factual knowledge in their parameters. However, their parametric knowledge may conflict with the information provided in the context -- this phenomenon, known as…

Computation and Language · Computer Science 2025-02-11 Yu Zhao , Alessio Devoto , Giwon Hong , Xiaotang Du , Aryo Pradipta Gema , Hongru Wang , Xuanli He , Kam-Fai Wong , Pasquale Minervini

Sparse autoencoders (SAEs) are widely used in mechanistic interpretability to project LLM activations onto sparse latent spaces. However, sparsity alone is an imperfect proxy for interpretability, and current training objectives often…

Machine Learning · Computer Science 2026-04-09 Vivek Narayanaswamy , Kowshik Thopalli , Bhavya Kailkhura , Wesam Sakla

While sparse autoencoders (SAEs) successfully extract interpretable features from language models, applying them to audio generation faces unique challenges: audio's dense nature requires compression that obscures semantic meaning, and…

Machine Learning · Computer Science 2025-10-31 Nathan Paek , Yongyi Zang , Qihui Yang , Randal Leistikow