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Graph autoencoders (AE) and variational autoencoders (VAE) recently emerged as powerful node embedding methods, with promising performances on challenging tasks such as link prediction and node clustering. Graph AE, VAE and most of their…

Machine Learning · Computer Science 2019-10-03 Guillaume Salha , Romain Hennequin , Michalis Vazirgiannis

Dynamic graph representation learning is a task to learn node embeddings over dynamic networks, and has many important applications, including knowledge graphs, citation networks to social networks. Graphs of this type are usually…

Social and Information Networks · Computer Science 2021-06-04 Xingzhi Guo , Baojian Zhou , Steven Skiena

Hyperspectral image (HSI) clustering groups pixels into clusters without labeled data, which is an important yet challenging task. For large-scale HSIs, most methods rely on superpixel segmentation and perform superpixel-level clustering…

Computer Vision and Pattern Recognition · Computer Science 2025-11-21 Jianhan Qi , Yuheng Jia , Hui Liu , Junhui Hou

Graph Transformers (GTs) have made remarkable achievements in graph-level tasks. However, most existing works regard graph structures as a form of guidance or bias for enhancing node representations, which focuses on node-central…

Machine Learning · Computer Science 2024-12-10 Xiaorui Qi , Qijie Bai , Yanlong Wen , Haiwei Zhang , Xiaojie Yuan

We consider the task of topology discovery of sparse random graphs using end-to-end random measurements (e.g., delay) between a subset of nodes, referred to as the participants. The rest of the nodes are hidden, and do not provide any…

Social and Information Networks · Computer Science 2012-03-06 Animashree Anandkumar , Avinatan Hassidim , Jonathan Kelner

Transformers have recently emerged as powerful neural networks for graph learning, showcasing state-of-the-art performance on several graph property prediction tasks. However, these results have been limited to small-scale graphs, where the…

Machine Learning · Computer Science 2023-12-19 Vijay Prakash Dwivedi , Yozen Liu , Anh Tuan Luu , Xavier Bresson , Neil Shah , Tong Zhao

Regular path queries (RPQs) find pairs of vertices of paths satisfying given regular expressions on an edge-labeled, directed multigraph. When evaluating an RPQ, the evaluation of a Kleene closure (i.e., Kleene plus or Kleene star) is very…

Databases · Computer Science 2024-10-28 Inju Na , Ilyeop Yi , Kyu-Young Whang , Yang-Sae Moon , Soon J. Hyun

Graph rewiring has emerged as a key technique to alleviate over-squashing in Graph Neural Networks (GNNs) and Graph Transformers by modifying the graph topology to improve information flow. While effective, rewiring inherently alters the…

Machine Learning · Computer Science 2025-10-24 Alexandre Benoit , Catherine Aitken , Yu He

Effectively capturing graph node sequences in the form of vector embeddings is critical to many applications. We achieve this by (i) first learning vector embeddings of single graph nodes and (ii) then composing them to compactly represent…

Machine Learning · Computer Science 2019-11-11 Swati Rallapalli , Liang Ma , Mudhakar Srivatsa , Ananthram Swami , Heesung Kwon , Graham Bent , Christopher Simpkin

In graphs with rich texts, incorporating textual information with structural information would benefit constructing expressive graph embeddings. Among various graph embedding models, random walk (RW)-based is one of the most popular and…

Artificial Intelligence · Computer Science 2019-10-15 Liheng Chen , Yanru Qu , Zhenghui Wang , Lin Qiu , Weinan Zhang , Ken Chen , Shaodian Zhang , Yong Yu

Social network analysis provides meaningful information about behavior of network members that can be used for diverse applications such as classification, link prediction. However, network analysis is computationally expensive because of…

Social and Information Networks · Computer Science 2018-07-30 Mohammad Mehdi Keikha , Maseud Rahgozar , Masoud Asadpour

Signed Graph Neural Networks (SGNNs) have been shown to be effective in analyzing complex patterns in real-world situations where positive and negative links coexist. However, SGNN models suffer from poor explainability, which limit their…

Machine Learning · Computer Science 2024-12-13 Lu Li , Jiale Liu , Xingyu Ji , Maojun Wang , Zeyu Zhang

In this work, we theoretically demonstrate that current graph positional encodings (PEs) are not beneficial and could potentially hurt performance in tasks involving heterophilous graphs, where nodes that are close tend to have different…

Machine Learning · Computer Science 2025-04-30 Michael Ito , Jiong Zhu , Dexiong Chen , Danai Koutra , Jenna Wiens

Representing a graph as a vector is a challenging task; ideally, the representation should be easily computable and conducive to efficient comparisons among graphs, tailored to the particular data and analytical task at hand. Unfortunately,…

Social and Information Networks · Computer Science 2018-11-16 Anton Tsitsulin , Davide Mottin , Panagiotis Karras , Alex Bronstein , Emmanuel Müller

Graph masked autoencoders (GMAE) have emerged as a significant advancement in self-supervised pre-training for graph-structured data. Previous GMAE models primarily utilize a straightforward random masking strategy for nodes or edges during…

Machine Learning · Computer Science 2024-04-25 Chuang Liu , Yuyao Wang , Yibing Zhan , Xueqi Ma , Dapeng Tao , Jia Wu , Wenbin Hu

There has been a recent surge in transformer-based architectures for learning on graphs, mainly motivated by attention as an effective learning mechanism and the desire to supersede handcrafted operators characteristic of message passing…

Machine Learning · Computer Science 2025-06-10 David Buterez , Jon Paul Janet , Dino Oglic , Pietro Lio

Recently, graph neural networks (GNNs) have been widely used for document classification. However, most existing methods are based on static word co-occurrence graphs without sentence-level information, which poses three challenges:(1) word…

Computation and Language · Computer Science 2022-03-22 Yinhua Piao , Sangseon Lee , Dohoon Lee , Sun Kim

Graph Auto-Encoders (GAEs) are powerful tools for graph representation learning. In this paper, we develop a novel Hierarchical Cluster-based GAE (HC-GAE), that can learn effective structural characteristics for graph data analysis. To this…

Machine Learning · Computer Science 2024-05-24 Zhuo Xu , Lu Bai , Lixin Cui , Ming Li , Yue Wang , Edwin R. Hancock

Graph-based methods are known to be successful in many machine learning and pattern classification tasks. These methods consider semi-structured data as graphs where nodes correspond to primitives (parts, interest points, segments, etc.)…

Computer Vision and Pattern Recognition · Computer Science 2019-01-01 Anjan Dutta , Hichem Sahbi

Transformers rely on positional encoding to compensate for the inherent permutation invariance of self-attention. Traditional approaches use absolute sinusoidal embeddings or learned positional vectors, while more recent methods emphasize…

Machine Learning · Computer Science 2025-11-18 Chase van de Geijn , Ayush Paliwal , Timo Lüddecke , Alexander S. Ecker
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