English
Related papers

Related papers: Supervised contrastive learning for cell stage cla…

200 papers

Cell segmentation is a major bottleneck in extracting quantitative single-cell information from microscopy data. The challenge is exasperated in the setting of microstructured environments. While deep learning approaches have proven useful…

Quantitative Methods · Quantitative Biology 2021-01-08 Tim Prangemeier , Christian Wildner , André O. Françani , Christoph Reich , Heinz Koeppl

Session-based recommendation systems(SBRS) are more suitable for the current e-commerce and streaming media recommendation scenarios and thus have become a hot topic. The data encountered by SBRS is typically highly sparse, which also…

Information Retrieval · Computer Science 2023-08-31 Zihan Wang , Gang Wu , Haotong Wang

Microscopy imaging plays a vital role in understanding many biological processes in development and disease. The recent advances in automation of microscopes and development of methods and markers for live cell imaging has led to rapid…

Computer Vision and Pattern Recognition · Computer Science 2017-05-10 Saad Ullah Akram , Juho Kannala , Lauri Eklund , Janne Heikkilä

In clinical In-Vitro Fertilization (IVF), identifying the most viable embryo for transfer is important to increasing the likelihood of a successful pregnancy. Traditionally, this process involves embryologists manually assessing embryos'…

Computer Vision and Pattern Recognition · Computer Science 2024-10-22 Junsik Kim , Zhiyi Shi , Davin Jeong , Johannes Knittel , Helen Y. Yang , Yonghyun Song , Wanhua Li , Yicong Li , Dalit Ben-Yosef , Daniel Needleman , Hanspeter Pfister

Lacking supervised data is an issue while training deep neural networks (DNNs), mainly when considering medical and biological data where supervision is expensive. Recently, Embedded Pseudo-Labeling (EPL) addressed this problem by using a…

Machine Learning · Computer Science 2023-02-07 Bárbara Caroline Benato , Alexandre Xavier Falcão , Alexandru-Cristian Telea

While data-driven approaches excel at many image analysis tasks, the performance of these approaches is often limited by a shortage of annotated data available for training. Recent work in semi-supervised learning has shown that meaningful…

Computer Vision and Pattern Recognition · Computer Science 2021-01-22 Mayank Golhar , Taylor L. Bobrow , MirMilad Pourmousavi Khoshknab , Simran Jit , Saowanee Ngamruengphong , Nicholas J. Durr

In the field of materials science, microscopy is the first and often only accessible method for structural characterization. There is a growing interest in the development of machine learning methods that can automate the analysis and…

Materials Science · Physics 2022-09-28 Shizhao Lu , Brian Montz , Todd Emrick , Arthi Jayaraman

For a global breeding organization, identifying the next generation of superior crops is vital for its success. Recognizing new genetic varieties requires years of in-field testing to gather data about the crop's yield, pest resistance,…

Computer Vision and Pattern Recognition · Computer Science 2021-08-03 Saba Moeinizade , Hieu Pham , Ye Han , Austin Dobbels , Guiping Hu

Deep learning algorithms offer a powerful means to automatically analyze the content of medical images. However, many biological samples of interest are primarily transparent to visible light and contain features that are difficult to…

Computer Vision and Pattern Recognition · Computer Science 2017-09-22 Roarke Horstmeyer , Richard Y. Chen , Barbara Kappes , Benjamin Judkewitz

This paper proposes an efficient system for classifying cervical cancer cells using pre-trained convolutional neural networks (CNNs). We first fine-tune five pre-trained CNNs and minimize the overall cost of misclassification by…

Computer Vision and Pattern Recognition · Computer Science 2024-02-27 Ashfiqun Mustari , Rushmia Ahmed , Afsara Tasnim , Jakia Sultana Juthi , G M Shahariar

Contrastive learning (CL) aims to learn useful representation without relying on expert annotations in the context of medical image segmentation. Existing approaches mainly contrast a single positive vector (i.e., an augmentation of the…

Computer Vision and Pattern Recognition · Computer Science 2022-03-08 Chenyu You , Ruihan Zhao , Lawrence Staib , James S. Duncan

With the growth of artificial intelligence (AI), there has been an increase in the adoption of computer vision and deep learning (DL) techniques for the evaluation of microscopy images and movies. This adoption has not only addressed…

Quantitative Methods · Quantitative Biology 2023-07-21 Binghao Chai , Christoforos Efstathiou , Haoran Yue , Viji M. Draviam

Previous work on action representation learning focused on global representations for short video clips. In contrast, many practical applications, such as video alignment, strongly demand learning the intensive representation of long…

Computer Vision and Pattern Recognition · Computer Science 2023-03-03 Minghao Chen , Renbo Tu , Chenxi Huang , Yuqi Lin , Boxi Wu , Deng Cai

For medical image segmentation, contrastive learning is the dominant practice to improve the quality of visual representations by contrasting semantically similar and dissimilar pairs of samples. This is enabled by the observation that…

Computer Vision and Pattern Recognition · Computer Science 2023-10-25 Chenyu You , Weicheng Dai , Yifei Min , Fenglin Liu , David A. Clifton , S Kevin Zhou , Lawrence Hamilton Staib , James S Duncan

Retinal vessel segmentation based on deep learning requires a lot of manual labeled data. That is time-consuming, laborious and professional. What is worse, the acquisition of abundant fundus images is difficult. These problems are more…

Image and Video Processing · Electrical Eng. & Systems 2019-08-13 Qiang Huo

High-frequency ultrasound (HFU) is well suited for imaging embryonic mice due to its noninvasive and real-time characteristics. However, manual segmentation of the brain ventricles (BVs) and body requires substantial time and expertise.…

Image and Video Processing · Electrical Eng. & Systems 2019-10-31 Tongda Xu , Ziming Qiu , William Das , Chuiyu Wang , Jack Langerman , Nitin Nair , Orlando Aristizabal , Jonathan Mamou , Daniel H. Turnbull , Jeffrey A. Ketterling , Yao Wang

Recent advances in Behavior Cloning (BC) have led to strong performance in robotic manipulation, driven by expressive models, sequence modeling of actions, and large-scale demonstration data. However, BC faces significant challenges when…

Robotics · Computer Science 2025-08-05 Sung-Wook Lee , Xuhui Kang , Brandon Yang , Yen-Ling Kuo

In the domain of battery research, the processing of high-resolution microscopy images is a challenging task, as it involves dealing with complex images and requires a prior understanding of the components involved. The utilization of deep…

Computer Vision and Pattern Recognition · Computer Science 2025-03-19 Ganesh Raghavendran , Bing Han , Fortune Adekogbe , Shuang Bai , Bingyu Lu , William Wu , Minghao Zhang , Ying Shirley Meng

The wealth of smartphone data collected by the Cosmic Ray Extremely Distributed Observatory(CREDO) greatly surpasses the capabilities of manual analysis. So, efficient means of rejectingthe non-cosmic-ray noise and identification of signals…

A two-stage training paradigm consisting of sequential pre-training and meta-training stages has been widely used in current few-shot learning (FSL) research. Many of these methods use self-supervised learning and contrastive learning to…

Computer Vision and Pattern Recognition · Computer Science 2022-09-20 Zhanyuan Yang , Jinghua Wang , Yingying Zhu