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Related papers: G2PDiffusion: Cross-Species Genotype-to-Phenotype …

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Diffusion models have revitalized the image generation domain, playing crucial roles in both academic research and artistic expression. With the emergence of new diffusion models, assessing the performance of text-to-image models has become…

Computer Vision and Pattern Recognition · Computer Science 2024-11-15 Chutian Meng , Fan Ma , Jiaxu Miao , Chi Zhang , Yi Yang , Yueting Zhuang

The fitness landscape encodes the mapping of genotypes to fitness and provides a succinct representation of possible trajectories followed by an evolving population. Evolutionary accessibility is quantified by the existence of…

Populations and Evolution · Quantitative Biology 2021-06-30 Joachim Krug

Diffusion models have shown promise in forecasting future data from multivariate time series. However, few existing methods account for recurring structures, or patterns, that appear within the data. We present Pattern-Guided Diffusion…

Machine Learning · Computer Science 2025-12-17 Vivian Lin , Kuk Jin Jang , Wenwen Si , Insup Lee

Gene expression profiling provides profound insights into molecular mechanisms, but its time-consuming and costly nature often presents significant challenges. In contrast, whole-slide hematoxylin and eosin (H&E) stained histological images…

Computer Vision and Pattern Recognition · Computer Science 2024-11-28 Ying Xiong , Linjing Liu , Yufei Cui , Shangyu Wu , Xue Liu , Antoni B. Chan , Chun Jason Xue

The recent wave of large-scale text-to-image diffusion models has dramatically increased our text-based image generation abilities. These models can generate realistic images for a staggering variety of prompts and exhibit impressive…

Machine Learning · Computer Science 2023-09-14 Alexander C. Li , Mihir Prabhudesai , Shivam Duggal , Ellis Brown , Deepak Pathak

Recent years have seen a rapid expansion of the model space explored in statistical phylogenetics, emphasizing the need for new approaches to statistical model representation and software development. Clear communication and representation…

Populations and Evolution · Quantitative Biology 2013-12-10 Sebastian Höhna , Tracy A. Heath , Bastien Boussau , Michael J. Landis , Fredrik Ronquist , John P. Huelsenbeck

Deep learning-based image generation has seen significant advancements with diffusion models, notably improving the quality of generated images. Despite these developments, generating images with unseen characteristics beneficial for…

Despite continued advancement in recent years, deep neural networks still rely on large amounts of training data to avoid overfitting. However, labeled training data for real-world applications such as healthcare is limited and difficult to…

MOTIVATION: Proteins fold into complex structures that are crucial for their biological functions. Experimental determination of protein structures is costly and therefore limited to a small fraction of all known proteins. Hence, different…

Biomolecules · Quantitative Biology 2018-04-18 David Menéndez Hurtado , Karolis Uziela , Arne Elofsson

Neural networks and evolutionary computation have a rich intertwined history. They most commonly appear together when an evolutionary algorithm optimises the parameters and topology of a neural network for reinforcement learning problems,…

Neural and Evolutionary Computing · Computer Science 2016-04-15 Alexander W. Churchill , Siddharth Sigtia , Chrisantha Fernando

Fashion attribute editing is a task that aims to convert the semantic attributes of a given fashion image while preserving the irrelevant regions. Previous works typically employ conditional GANs where the generator explicitly learns the…

Computer Vision and Pattern Recognition · Computer Science 2022-10-13 Chaerin Kong , DongHyeon Jeon , Ohjoon Kwon , Nojun Kwak

The genotype-phenotype map is an essential object in our understanding of organismal complexity and adaptive properties, determining at once genomic plasticity and those constraints that may limit the ability of genomes to attain…

Populations and Evolution · Quantitative Biology 2015-02-18 Clemente F. Arias , Pablo Catalán , Susanna Manrubia , José A. Cuesta

An essential quantity to ensure evolvability of populations is the navigability of the genotype space. Navigability relies on the existence of sufficiently large genotype networks, that is ensembles of sequences with the same phenotype that…

Populations and Evolution · Quantitative Biology 2017-04-20 Susanna Manrubia , Jose A. Cuesta

Image-to-image translation (I2IT) refers to the process of transforming images from a source domain to a target domain while maintaining a fundamental connection in terms of image content. In the past few years, remarkable advancements in…

Computer Vision and Pattern Recognition · Computer Science 2023-12-04 Or Greenberg , Eran Kishon , Dani Lischinski

The association of a given human phenotype to a genetic variant remains a critical challenge for biology. We present a novel system called PhenoLinker capable of associating a score to a phenotype-gene relationship by using heterogeneous…

Text-to-image models (T2I) such as StableDiffusion have been used to generate high quality images of people. However, due to the random nature of the generation process, the person has a different appearance e.g. pose, face, and clothing,…

Computer Vision and Pattern Recognition · Computer Science 2023-12-19 Soon Yau Cheong , Armin Mustafa , Andrew Gilbert

Recognition of evolutionary units (species, populations) requires integrating several kinds of data such as genetic or phenotypic markers or spatial information, in order to get a comprehensive view concerning the differentiation of the…

Populations and Evolution · Quantitative Biology 2011-12-22 Gilles Guillot , Sabrina Renaud , Ronan Ledevin , Joahn Michaux , Julien Claude

Text-to-Image (T2I) models have transformed visual content creation, producing highly realistic images from natural language prompts. However, concerns persist around their potential to replicate and magnify existing societal biases. To…

Computer Vision and Pattern Recognition · Computer Science 2025-06-18 Sedat Porikli , Vedat Porikli

Recent advancements in Text-to-Image (T2I) diffusion models have demonstrated impressive success in generating high-quality images with zero-shot generalization capabilities. Yet, current models struggle to closely adhere to prompt…

Computer Vision and Pattern Recognition · Computer Science 2024-01-31 Hyun Kang , Dohae Lee , Myungjin Shin , In-Kwon Lee

Image data augmentation constitutes a critical methodology in modern computer vision tasks, since it can facilitate towards enhancing the diversity and quality of training datasets; thereby, improving the performance and robustness of…

Computer Vision and Pattern Recognition · Computer Science 2025-01-13 Panagiotis Alimisis , Ioannis Mademlis , Panagiotis Radoglou-Grammatikis , Panagiotis Sarigiannidis , Georgios Th. Papadopoulos
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