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Heterogeneous graph neural networks (HGNNs) excel at capturing structural and semantic information in heterogeneous graphs (HGs), while struggling to generalize across domains and tasks. With the rapid advancement of large language models…

Social and Information Networks · Computer Science 2025-07-31 Jinyu Yang , Cheng Yang , Shanyuan Cui , Zeyuan Guo , Liangwei Yang , Muhan Zhang , Zhiqiang Zhang , Chuan Shi

Lots of learning tasks require dealing with graph data which contains rich relation information among elements. Modeling physics systems, learning molecular fingerprints, predicting protein interface, and classifying diseases demand a model…

Machine Learning · Computer Science 2021-10-07 Jie Zhou , Ganqu Cui , Shengding Hu , Zhengyan Zhang , Cheng Yang , Zhiyuan Liu , Lifeng Wang , Changcheng Li , Maosong Sun

Graph Neural Networks (GNNs) have evolved to understand graph structures through recursive exchanges and aggregations among nodes. To enhance robustness, self-supervised learning (SSL) has become a vital tool for data augmentation.…

Computation and Language · Computer Science 2024-05-08 Jiabin Tang , Yuhao Yang , Wei Wei , Lei Shi , Lixin Su , Suqi Cheng , Dawei Yin , Chao Huang

Heterogeneous graph learning aims to capture complex relationships and diverse relational semantics among entities in a heterogeneous graph to obtain meaningful representations for nodes and edges. Recent advancements in heterogeneous graph…

Computation and Language · Computer Science 2024-05-21 Jiabin Tang , Yuhao Yang , Wei Wei , Lei Shi , Long Xia , Dawei Yin , Chao Huang

Graph Neural Networks (GNNs), despite achieving remarkable performance across different tasks, are theoretically bounded by the 1-Weisfeiler-Lehman test, resulting in limitations in terms of graph expressivity. Even though prior works on…

Machine Learning · Computer Science 2024-04-02 Quang Truong , Peter Chin

Existing foundation models, such as CLIP, aim to learn a unified embedding space for multimodal data, enabling a wide range of downstream web-based applications like search, recommendation, and content classification. However, these models…

Machine Learning · Computer Science 2025-04-28 Yufei He , Yuan Sui , Xiaoxin He , Yue Liu , Yifei Sun , Bryan Hooi

The era of foundation models has revolutionized AI research, yet Graph Foundation Models (GFMs) remain constrained by the scarcity of large-scale graph corpora. Traditional graph data synthesis techniques primarily focus on simplistic…

Machine Learning · Computer Science 2025-05-06 Enjun Du , Xunkai Li , Tian Jin , Zhihan Zhang , Rong-Hua Li , Guoren Wang

Pretrained Language Models (PLMs) such as BERT have revolutionized the landscape of Natural Language Processing (NLP). Inspired by their proliferation, tremendous efforts have been devoted to Pretrained Graph Models (PGMs). Owing to the…

Machine Learning · Computer Science 2022-03-22 Jun Xia , Yanqiao Zhu , Yuanqi Du , Stan Z. Li

Graph Neural Networks (GNNs) are powerful tools for processing relational data but often struggle to generalize to unseen graphs, giving rise to the development of Graph Foundational Models (GFMs). However, current GFMs are challenged by…

Machine Learning · Computer Science 2026-05-25 Weishuo Ma , Yanbo Wang , Xiyuan Wang , Lei Zou , Muhan Zhang

Electroencephalography (EEG) signals provide critical insights for applications in disease diagnosis and healthcare. However, the scarcity of labeled EEG data poses a significant challenge. Foundation models offer a promising solution by…

Machine Learning · Computer Science 2025-02-25 Limin Wang , Toyotaro Suzumura , Hiroki Kanezashi

It remains unclear whether graph language models learn structural regularities or merely memorize training graphs; this cannot be resolved by current aggregate fidelity metrics alone. We develop a calibrated diagnostic protocol that…

Machine Learning · Computer Science 2026-05-08 Masatsugu Yamada , Mahito Sugiyama

Large scale pretrained models have revolutionized Natural Language Processing (NLP) and Computer Vision (CV), showcasing remarkable cross domain generalization abilities. However, in graph learning, models are typically trained on…

Computation and Language · Computer Science 2025-10-03 Ruyue Liu , Rong Yin , Xiangzhen Bo , Xiaoshuai Hao , Yong Liu , Jinwen Zhong , Can Ma , Weiping Wang

Learning on Graphs has attracted immense attention due to its wide real-world applications. The most popular pipeline for learning on graphs with textual node attributes primarily relies on Graph Neural Networks (GNNs), and utilizes shallow…

Machine Learning · Computer Science 2024-01-17 Zhikai Chen , Haitao Mao , Hang Li , Wei Jin , Hongzhi Wen , Xiaochi Wei , Shuaiqiang Wang , Dawei Yin , Wenqi Fan , Hui Liu , Jiliang Tang

We present our work on developing and training scalable, trustworthy, and energy-efficient predictive graph foundation models (GFMs) using HydraGNN, a multi-headed graph convolutional neural network architecture. HydraGNN expands the…

Foundation models have shown remarkable cross-domain generalization in language and vision, inspiring the development of graph foundation models (GFMs). However, existing GFMs typically assume centralized access to multi-domain graphs,…

Machine Learning · Computer Science 2025-10-10 Zhengyu Wu , Yinlin Zhu , Xunkai Li , Ziang Qiu , Rong-Hua Li , Guoren Wang , Chenghu Zhou

Graph neural networks (GNN) represent an emerging line of deep learning models that operate on graph structures. It is becoming more and more popular due to its high accuracy achieved in many graph-related tasks. However, GNN is not as well…

Hardware Architecture · Computer Science 2021-12-28 Zhihui Zhang , Jingwen Leng , Lingxiao Ma , Youshan Miao , Chao Li , Minyi Guo

Foundation models have shown great promise in various fields of study. A potential application of such models is in computer network traffic analysis, where these models can grasp the complexities of network traffic dynamics and adapt to…

Machine Learning · Computer Science 2024-09-13 Louis Van Langendonck , Ismael Castell-Uroz , Pere Barlet-Ros

Text-attributed graphs require models to effectively integrate both structural topology and semantic content. Recent approaches apply large language models to graphs by linearizing structures into token sequences through random walks. These…

Graphics · Computer Science 2025-12-23 Heng Zheng , Haochen You , Zijun Liu , Zijian Zhang , Lubin Gan , Hao Zhang , Wenjun Huang , Jin Huang

Graph Neural Networks (GNNs) are almost universally built on a single primitive: the neighborhood. Regardless of architectural variations, message passing ultimately aggregates over neighborhoods, which intrinsically limits expressivity and…

Machine Learning · Computer Science 2026-04-29 Amirreza Shiralinasab Langari , Leila Yeganeh , Kim Khoa Nguyen

The growing ubiquity of relational data structured as graphs has underscored the need for graph learning models with exceptional generalization capabilities. However, current approaches often struggle to effectively extract generalizable…

Machine Learning · Computer Science 2024-08-21 Lianghao Xia , Chao Huang