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Biomedical image analysis is fundamental for biomedical discovery in cell biology, pathology, radiology, and many other biomedical domains. Holistic image analysis comprises interdependent subtasks such as segmentation, detection, and…

Label-free detecting multiple analytes in a high-throughput fashion has been one of the long-sought goals in biosensing applications. Yet, for all-optical approaches, interfacing state-of-the-art label-free techniques with microfluidics…

Quantitative Methods · Quantitative Biology 2023-08-14 Alexia Stollmann , Jose Garcia-Guirado , Jae-Sang Hong , Hyungsoon Im , Hakho Lee , Jaime Ortega Arroyo , Romain Quidant

In this work, we propose the BioNetExplorer framework to systematically generate and explore multiple DNN architectures for bio-signal processing in wearables. Our framework adapts key neural architecture parameters to search for an…

Signal Processing · Electrical Eng. & Systems 2021-09-08 Bharath Srinivas Prabakaran , Asima Akhtar , Semeen Rehman , Osman Hasan , Muhammad Shafique

Attempting to apply deep learning methods to wood panels bark removal equipment to enhance the quality and efficiency of bark removal is a significant and challenging endeavor. This study develops and tests a deep learning-based wood panels…

Computer Vision and Pattern Recognition · Computer Science 2024-10-17 Rijun Wang , Guanghao Zhang , Hongyang Chen , Xinye Yu , Yesheng Chen , Fulong Liang , Xiangwei Mou , Bo Wang

Repository-scale code reasoning is a cornerstone of modern AI-assisted software engineering, enabling Large Language Models (LLMs) to handle complex workflows from program comprehension to complex debugging. However, balancing accuracy with…

Software Engineering · Computer Science 2026-03-04 Zhonghang Li , Zongwei Li , Yuxuan Chen , Han Shi , Jiawei Li , Jierun Chen , Haoli Bai , Chao Huang

We present the VASPKIT, a command-line program that aims at providing a powerful and user-friendly interface to perform high-throughput analysis of a variety of material properties from the raw data produced by the VASP code. It consists of…

Materials Science · Physics 2021-06-03 Vei Wang , Nan Xu , Jin Cheng Liu , Gang Tang , Wen-Tong Geng

The past decade has seen unprecedented growth in active matter and autonomous biomaterials research, yielding diverse classes of materials that promise revolutionary applications such as self-healing infrastructure and self-sensing tissue…

Physics Education · Physics 2025-05-05 Megan T. Valentine , Rae M. Robertson-Anderson

With the achievement on the additive manufacturing, the mechanical properties of architectured materials can be precisely designed by tailoring microstructures. As one of the primary design objectives, the elastic isotropy is of great…

Applied Physics · Physics 2021-04-15 Anran Wei , Jie Xiong , Weidong Yang , Fenglin Guo

Over the past decades, we have witnessed a rapid emergence of soft and reconfigurable robots thanks to their capability to interact safely with humans and adapt to complex environments. However, their softness makes accurate control very…

Robotics · Computer Science 2024-11-13 Jun Wang , Zhi Qiao , Wenlong Zhang , Suyi Li

Nanoindentation involves probing a hard diamond tip into a material, where the load and the displacement experienced by the tip is recorded continuously. This load-displacement data is a direct function of material's innate stress-strain…

Computational Engineering, Finance, and Science · Computer Science 2016-12-13 Salah U. Hamim

Industrial Computer-Aided Design (CAD) code generation requires models to produce executable parametric programs from visual or textual inputs. Beyond recognizing the outer shape of a part, this task involves understanding its 3D structure,…

Artificial Intelligence · Computer Science 2026-05-13 Haozhe Zhang , Kaichen Liu , Miaomiao Chen , Lei Li , Shaojie Yang , Cheng Peng , Hanjie Chen

High throughput mRNA expression profiling can be used to characterize the response of cell culture models to perturbations such as pharmacologic modulators and genetic perturbations. As profiling campaigns expand in scope, it is important…

Genomics · Quantitative Biology 2017-04-12 Tracey Filzen , Peter Kutchukian , Jeffrey Hermes , Jing Li , Matthew Tudor

Despite recent breakthroughs in understanding how protein sequence relates to structure and function, considerably less attention has been paid to the general features of protein surfaces beyond those regions involved in binding and…

Biomolecules · Quantitative Biology 2024-07-26 John M. McBride , Aleksei Koshevarnikov , Marta Siek , Bartosz A. Grzybowski , Tsvi Tlusty

The increased adoption of reinforced polymer (RP) composite materials, driven by eco-design standards, calls for a fine balance between lightness, stiffness, and effective vibration control. These materials are integral to enhancing…

Machine Learning · Computer Science 2023-10-25 Victor Hoffmann , Ilias Nahmed , Parisa Rastin , Guénaël Cabanes , Julien Boisse

In this work, we introduce BBoE, a bidirectional, kinodynamic, sampling-based motion planner that consistently and quickly finds low-cost solutions in environments with varying obstacle clutter. The algorithm combines exploration and…

Robotics · Computer Science 2025-09-25 Srikrishna Bangalore Raghu , Alessandro Roncone

Markerless motion capture using computer vision and human pose estimation (HPE) has the potential to expand access to precise movement analysis. This could greatly benefit rehabilitation by enabling more accurate tracking of outcomes and…

Computer Vision and Pattern Recognition · Computer Science 2023-03-21 R. James Cotton , Allison DeLillo , Anthony Cimorelli , Kunal Shah , J. D. Peiffer , Shawana Anarwala , Kayan Abdou , Tasos Karakostas

The sense of touch is fundamental to how we interact with the physical and digital world. Conventional interactive surfaces and tactile interfaces use electronic sensors embedded into objects, however this approach poses serious challenges…

We present a novel method for characterizing the microstructure of a material from volumetric datasets such as 3D image data from computed tomography (CT). The method is based on a new statistical model for the distribution of voxel…

Materials Science · Physics 2021-01-06 Elise Otterlei Brenne , Vedrana Andersen Dahl , Peter Stanley Jørgensen

A crucial problem in achieving innovative high-throughput materials growth with machine learning and automation techniques, such as Bayesian optimization (BO) and robotic experimentation, has been a lack of an appropriate way to handle…

Soft materials, such as colloidal suspensions, polymer solutions, and biological systems, are typically multicomponent mixtures of macromolecules and simpler components (e.g., microions, monomers, solvent) that can assemble into complex…

Soft Condensed Matter · Physics 2015-05-13 Alan R. Denton