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Deep neural networks (DNN) have been used successfully in many scientific problems for their high prediction accuracy, but their application to genetic studies remains challenging due to their poor interpretability. In this paper, we…

Machine Learning · Computer Science 2021-10-01 Peyman H. Kassani , Fred Lu , Yann Le Guen , Zihuai He

Randomized Uphill Climbing is a lightweight, stochastic search heuristic that has delivered state of the art equity alpha factors for quantitative hedge funds. I propose to generalize RUC into a model agnostic feature optimization framework…

Machine Learning · Computer Science 2025-05-08 Nguyen Van Thanh

Variable selection has received widespread attention over the last decade as we routinely encounter high-throughput datasets in complex biological and environment research. Most Bayesian variable selection methods are restricted to mixture…

Methodology · Statistics 2015-03-24 Hanning Li , Debdeep Pati

Despite the popularity of feature importance (FI) measures in interpretable machine learning, the statistical adequacy of these methods is rarely discussed. From a statistical perspective, a major distinction is between analyzing a…

Machine Learning · Statistics 2023-05-03 Kristin Blesch , David S. Watson , Marvin N. Wright

With the growing adoption of deep learning models in different real-world domains, including computational biology, it is often necessary to understand which data features are essential for the model's decision. Despite extensive recent…

Machine Learning · Computer Science 2022-10-04 Prashnna K Gyawali , Xiaoxia Liu , James Zou , Zihuai He

New generations of power systems, containing high shares of renewable energy resources, require improved data-driven tools which can swiftly adapt to changes in system operation. Many of these tools, such as ones using machine learning,…

Systems and Control · Electrical Eng. & Systems 2024-03-12 Ignasi Ventura Nadal , Samuel Chevalier

The knockoff filter introduced by Barber and Cand\`es 2016 is an elegant framework for controlling the false discovery rate in variable selection. While empirical results indicate that this methodology is not too conservative, there is no…

Statistics Theory · Mathematics 2020-01-13 Jingbo Liu , Philippe Rigollet

The paper considers variable selection in linear regression models where the number of covariates is possibly much larger than the number of observations. High dimensionality of the data brings in many complications, such as (possibly…

Methodology · Statistics 2016-11-29 Haeran Cho , Piotr Fryzlewicz

A new approach for efficiently exploring the configuration space and computing the free energy of large atomic and molecular systems is proposed, motivated by an analogy with reinforcement learning. There are two major components in this…

Chemical Physics · Physics 2018-04-18 Linfeng Zhang , Han Wang , Weinan E

We consider problems where many, somewhat redundant, hypotheses are tested and we are interested in reporting the most precise rejections, with false discovery rate (FDR) control. This is the case, for example, when researchers are…

Methodology · Statistics 2024-04-23 Paula Gablenz , Chiara Sabatti

Negative sampling is essential for implicit-feedback-based collaborative filtering, which is used to constitute negative signals from massive unlabeled data to guide supervised learning. The state-of-the-art idea is to utilize hard negative…

Information Retrieval · Computer Science 2023-08-14 Yuhan Zhao , Rui Chen , Riwei Lai , Qilong Han , Hongtao Song , Li Chen

For a machine learning model deployed in real world scenarios, the ability of detecting out-of-distribution (OOD) samples is indispensable and challenging. Most existing OOD detection methods focused on exploring advanced training skills or…

Machine Learning · Computer Science 2024-02-16 Chao Chen , Zhihang Fu , Kai Liu , Ze Chen , Mingyuan Tao , Jieping Ye

Unsupervised feature selection is an important method to reduce dimensions of high dimensional data without labels, which is benefit to avoid ``curse of dimensionality'' and improve the performance of subsequent machine learning tasks, like…

Machine Learning · Computer Science 2020-12-29 Yanyong Huang , Zongxin Shen , Fuxu Cai , Tianrui Li , Fengmao Lv

Tensor decomposition of convolutional and fully-connected layers is an effective way to reduce parameters and FLOP in neural networks. Due to memory and power consumption limitations of mobile or embedded devices, the quantization step is…

Machine Learning · Computer Science 2023-08-10 Daria Cherniuk , Stanislav Abukhovich , Anh-Huy Phan , Ivan Oseledets , Andrzej Cichocki , Julia Gusak

Quantifying uncertainty in deep regression models is important both for understanding the confidence of the model and for safe decision-making in high-risk domains. Existing approaches that yield prediction intervals overlook distributional…

Machine Learning · Computer Science 2025-12-02 Adriel Sosa Marco , John Daniel Kirwan , Alexia Toumpa , Simos Gerasimou

High-dimensional feature selection is a central problem in a variety of application domains such as machine learning, image analysis, and genomics. In this paper, we propose graph-based tests as a useful basis for feature selection. We…

Methodology · Statistics 2024-08-13 Swarnadip Ghosh , Somabha Mukherjee , Divyansh Agarwal , Yichen He , Mingzhi Song , Xuejiao Pei

Variable selection methods have been developed in linear regression to provide sparse solutions. Recent studies have focused on further interpretations on the sparse solutions in terms of false positive control. In this paper, we consider…

Statistics Theory · Mathematics 2019-11-25 X. Jessie Jeng , Xiongzhi Chen

When search methods are being designed it is very important to know which parameters have the greatest influence on the behaviour and performance of the algorithm. To this end, algorithm parameters are commonly calibrated by means of either…

Convolutional neural networks (CNN) have demonstrated remarkable performance when the training and testing data are from the same distribution. However, such trained CNN models often largely degrade on testing data which is unseen and…

Computer Vision and Pattern Recognition · Computer Science 2022-10-27 Haozhe Liu , Wentian Zhang , Jinheng Xie , Haoqian Wu , Bing Li , Ziqi Zhang , Yuexiang Li , Yawen Huang , Bernard Ghanem , Yefeng Zheng

International large-scale assessments (ILSAs) play an important role in educational research and policy making. They collect valuable data on education quality and performance development across many education systems, giving countries the…

Methodology · Statistics 2023-11-16 Zilong Xie , Yunxiao Chen , Matthias von Davier , Haolei Weng
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