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Brain morphometry from magnetic resonance imaging (MRI) is a consolidated biomarker for many neurodegenerative diseases. Recent advances in this domain indicate that deep convolutional neural networks can infer morphometric measurements…

Image and Video Processing · Electrical Eng. & Systems 2020-09-09 Rodrigo Santa Cruz , Léo Lebrat , Pierrick Bourgeat , Vincent Doré , Jason Dowling , Jurgen Fripp , Clinton Fookes , Olivier Salvado

Topological structures in image data, such as connected components and loops, play a crucial role in understanding image content (e.g., biomedical objects). % Despite remarkable successes of numerous image processing methods that rely on…

Computer Vision and Pattern Recognition · Computer Science 2025-08-05 Pengfei Gu , Hongxiao Wang , Yejia Zhang , Huimin Li , Chaoli Wang , Danny Chen

Objective: Automatic sleep scoring is crucial for diagnosing sleep disorders. Existing frameworks based on Polysomnography often rely on long sequences of input signals to predict sleep stages, which can introduce complexity. Moreover,…

Signal Processing · Electrical Eng. & Systems 2025-12-08 Muhammad Sudipto Siam Dip , Mohammod Abdul Motin , Chandan Karmakar , Thomas Penzel , Marimuthu Palaniswami

Decoding visual stimuli from neural activity is essential for understanding the human brain. While fMRI methods have successfully reconstructed static images, fMRI-to-video reconstruction faces challenges due to the need for capturing…

Computer Vision and Pattern Recognition · Computer Science 2025-07-17 Haonan Wang , Qixiang Zhang , Lehan Wang , Xuanqi Huang , Xiaomeng Li

Convolutional neural networks (CNNs) are one of the most popular models of Artificial Neural Networks (ANN)s in Computer Vision (CV). A variety of CNN-based structures were developed by researchers to solve problems like image…

Computer Vision and Pattern Recognition · Computer Science 2022-09-30 Bowen Qiu , Daniela Raicu , Jacob Furst , Roselyne Tchoua

Though modern neural networks have achieved impressive performance in both vision and language tasks, we know little about the functions that they implement. One possibility is that neural networks implicitly break down complex tasks into…

Computation and Language · Computer Science 2023-11-08 Michael A. Lepori , Thomas Serre , Ellie Pavlick

Multi-task optimization is a powerful approach for solving a large number of tasks in parallel. However, existing algorithms face distinct limitations: Population-based methods scale poorly and remain underexplored for large task sets.…

Machine Learning · Computer Science 2026-04-27 Julian Hatzky , Thomas Bartz-Beielstein , A. E. Eiben , Anil Yaman

In this paper, we propose HiPoNet, an end-to-end differentiable neural network for regression, classification, and representation learning on high-dimensional point clouds. Our work is motivated by single-cell data which can have very…

As Artificial Intelligence (AI) models are increasingly integrated into critical systems, the need for a robust framework to establish the trustworthiness of AI is increasingly paramount. While collaborative efforts have established…

Machine Learning · Computer Science 2026-03-02 Haniyeh Ehsani Oskouie , Sajjad Ghiasvand , Lionel Levine , Majid Sarrafzadeh

Accurate segmentation of tubular, network-like structures, such as vessels, neurons, or roads, is relevant to many fields of research. For such structures, the topology is their most important characteristic; particularly preserving…

Computer Vision and Pattern Recognition · Computer Science 2022-07-18 Suprosanna Shit , Johannes C. Paetzold , Anjany Sekuboyina , Ivan Ezhov , Alexander Unger , Andrey Zhylka , Josien P. W. Pluim , Ulrich Bauer , Bjoern H. Menze

Graph neural networks (GNNs) are a powerful architecture for tackling graph learning tasks, yet have been shown to be oblivious to eminent substructures such as cycles. We present TOGL, a novel layer that incorporates global topological…

Machine Learning · Computer Science 2022-03-18 Max Horn , Edward De Brouwer , Michael Moor , Yves Moreau , Bastian Rieck , Karsten Borgwardt

Majority of Artificial Neural Network (ANN) implementations in autonomous systems use a fixed/user-prescribed network topology, leading to sub-optimal performance and low portability. The existing neuro-evolution of augmenting topology or…

Neural and Evolutionary Computing · Computer Science 2018-07-24 Sharat Chidambaran , Amir Behjat , Souma Chowdhury

Complex problem solving is a high level cognitive process which has been thoroughly studied over the last decade. The Tower of London (TOL) is a task that has been widely used to study problem-solving. In this study, we aim to explore the…

Neurons and Cognition · Quantitative Biology 2018-10-12 Abdullah Alchihabi , Omer Ekmekci , Baran B. Kivilcim , Sharlene D. Newman , Fatos T. Yarman Vural

Graph Neural Networks (GNNs) have shown remarkable success across various scientific fields, yet their adoption in critical decision-making is often hindered by a lack of interpretability. Recently, intrinsically interpretable GNNs have…

Machine Learning · Computer Science 2025-10-07 Cheng Xin , Fan Xu , Xin Ding , Jie Gao , Jiaxin Ding

Spatial navigation in mammals is based on building a mental representation of their environment---a cognitive map. However, both the nature of this cognitive map and its underpinning in neural structures and activity remains vague. A key…

Neurons and Cognition · Quantitative Biology 2016-03-22 A. Babichev , S. Cheng , Yu. Dabaghian

Hypergraphs, with their capacity to depict high-order relationships, have emerged as a significant extension of traditional graphs. Although Graph Neural Networks (GNNs) have remarkable performance in graph representation learning, their…

Machine Learning · Computer Science 2024-11-07 Khaled Mohammed Saifuddin , Mehmet Emin Aktas , Esra Akbas

We present an exploration of machine learning architectures for predicting brain responses to realistic images on occasion of the Algonauts Challenge 2023. Our research involved extensive experimentation with various pretrained models.…

Neurons and Cognition · Quantitative Biology 2023-09-20 Riccardo Chimisso , Sathya Buršić , Paolo Marocco , Giuseppe Vizzari , Dimitri Ognibene

The ubiquity of topographic maps in the brain has long been known, and molecular mechanisms for the formation of topographic organization of neural systems have been revealed. Less attention has been given to the question of why are the…

Neurons and Cognition · Quantitative Biology 2018-11-13 Shigeko Takahashi

Neuroevolution is a process of training neural networks (NN) through an evolutionary algorithm, usually to serve as a state-to-action mapping model in control or reinforcement learning-type problems. This paper builds on the Neuro Evolution…

Neural and Evolutionary Computing · Computer Science 2019-03-19 Amir Behjat , Sharat Chidambaran , Souma Chowdhury

Recently, methods have been developed to accurately predict the testing performance of a Deep Neural Network (DNN) on a particular task, given statistics of its underlying topological structure. However, further leveraging this newly found…

Computer Vision and Pattern Recognition · Computer Science 2021-12-01 Stuart Synakowski , Fabian Benitez-Quiroz , Aleix M. Martinez
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