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The drive for reproducibility in the computational sciences has provoked discussion and effort across a broad range of perspectives: technological, legislative/policy, education, and publishing. Discussion on these topics is not new, but…

Quantitative Methods · Quantitative Biology 2018-10-10 Daniel G. Hurley , Joseph Cursons , Matthew Faria , David M. Budden , Vijay Rajagopal , Edmund J. Crampin

Retrieval-Augmented Generation (RAG) is increasingly employed in generative AI-driven scientific workflows to integrate rapidly evolving scientific knowledge bases, yet its reliability is frequently compromised by non-determinism in their…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-24 Baiqiang Wang , Dongfang Zhao , Nathan R Tallent , Luanzheng Guo

Large language models (LLMs) have shown growing potential in software engineering, yet few benchmarks evaluate their ability to repair software during migration across instruction set architectures (ISAs). Cross-ISA migration, such as…

Recent reproducibility case studies have raised concerns showing that much of the deposited research has not been reproducible. One of their conclusions was that the way data repositories store research data and code cannot fully facilitate…

Digital Libraries · Computer Science 2020-06-18 Ana Trisovic , Philip Durbin , Tania Schlatter , Gustavo Durand , Sonia Barbosa , Danny Brooke , Mercè Crosas

Although a standard in natural science, reproducibility has been only episodically applied in experimental computer science. Scientific papers often present a large number of tables, plots and pictures that summarize the obtained results,…

Digital Libraries · Computer Science 2017-09-06 Fernando Chirigati , Rebecca Capone , Dennis Shasha , Remi Rampin , Juliana Freire

In modern software development workflows, the open-source software supply chain contributes significantly to efficient and convenient engineering practices. With increasing system complexity, using open-source software as third-party…

Software Engineering · Computer Science 2025-11-18 Zihe Yan , Kai Luo , Haoyu Yang , Yang Yu , Zhuosheng Zhang , Guancheng Li

Functional Programming has seen a resurgence in interest in the last few years and is often mentioned in opposition to Object-Orientated Programming. However, Object-Orientated Programming can actually absorb some of the lessons of…

Programming Languages · Computer Science 2021-04-02 Seamus Brady

Fixing bugs in large programs is a challenging task that demands substantial time and effort. Once a bug is found, it is reported to the project maintainers, who work with the reporter to fix it and eventually close the issue. However,…

Software Engineering · Computer Science 2025-10-17 Qiushi Wu , Yue Xiao , Dhilung Kirat , Kevin Eykholt , Jiyong Jang , Douglas Lee Schales

Reproducibility is a fundamental requirement of the scientific process since it enables outcomes to be replicated and verified. Computational scientific experiments can benefit from improved reproducibility for many reasons, including…

Databases · Computer Science 2019-09-04 Maria Luiza Mondelli , A. Townsend Peterson , Luiz M. R. Gadelha

Software security relies on effective vulnerability detection and patching, yet determining whether a patch fully eliminates risk remains an underexplored challenge. Existing vulnerability benchmarks often treat patched functions as…

Software Engineering · Computer Science 2026-04-24 Mohammad Farhad , Shuvalaxmi Dass

Reproducibility must validate architectural robustness, not just numerical accuracy. We evaluate ColBERT-v2 and ConstBERT across five dimensions, finding that while ConstBERT reproduces within 0.05% MRR@10 on MS-MARCO, both models show a…

Information Retrieval · Computer Science 2026-04-17 Utshab Kumar Ghosh , Ashish David , Shubham Chatterjee

Replicability requires that algorithmic conclusions remain consistent when rerun on independently drawn data. A central structural question is composition: given $k$ problems each admitting a $\rho$-replicable algorithm with sample…

Flaky tests pass and fail non-deterministically when run on the same version of code. Although many techniques have been proposed to detect, debug, and repair flaky tests, reproducing their failures remains a major challenge due to their…

Software Engineering · Computer Science 2026-05-22 Suzzana Rafi , Mahbub-Ul-Hoque Sumon , Md Erfan , Maruf Morshed Khan , August Shi , Wing Lam

This paper presents results from the MSR 2021 Hackathon. Our team investigates files/projects that contain known security vulnerabilities and how widespread they are throughout repositories in open source software. These security…

Software Engineering · Computer Science 2021-03-24 David Reid , Kalvin Eng , Chris Bogart , Adam Tutko

We study the evolution of the largest known corpus of publicly available source code, i.e., the Software Heritage archive (4B unique source code files, 1B commits capturing their development histories across 50M software projects). On such…

Software Engineering · Computer Science 2019-06-20 Guillaume Rousseau , Roberto Di Cosmo , Stefano Zacchiroli

Reproducibility is a cornerstone of scientific progress, yet its state in large language model (LLM)-based software engineering (SE) research remains poorly understood. This paper presents the first large-scale, empirical study of…

Software Engineering · Computer Science 2025-12-02 Mohammed Latif Siddiq , Arvin Islam-Gomes , Natalie Sekerak , Joanna C. S. Santos

Data is the most powerful decision-making tool at our disposal. However, despite the exponentially growing volumes of data generated in the world, putting it to effective use still presents many challenges. Relevant data seems to be never…

Databases · Computer Science 2021-11-12 Sergii Mikhtoniuk , Ozge Nilay Yalcin

Upgradeability problems are a critical issue in modern operating systems. The problem consists in finding the "best" solution according to some criteria, to install, remove or upgrade packages in a given installation. This is a difficult…

Logic in Computer Science · Computer Science 2010-07-08 Claude Michel , Michel Rueher

While free/libre and open source software (FLOSS) is critical to global computing infrastructure, the maintenance of widely-adopted FLOSS packages is dependent on volunteer developers who select their own tasks. Risk of failure due to the…

Software Engineering · Computer Science 2024-04-29 Matthew Gaughan , Kaylea Champion , Sohyeon Hwang

With the advent of open source software, a veritable treasure trove of previously proprietary software development data was made available. This opened the field of empirical software engineering research to anyone in academia. Data that is…

Software Engineering · Computer Science 2022-04-19 Adam Tutko , Austin Z. Henley , Audris Mockus