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Radio-frequency dosimetry is an important process in human safety and for compliance of related products. Recently, computational human models generated from medical images have often been used for such assessment, especially to consider…

Machine Learning · Computer Science 2020-04-29 Essam A. Rashed , Yinliang Diao , Akimasa Hirata

Multi-echo magnetic resonance (MR) images are acquired by changing the echo times (for T2 weighted) or relaxation times (for T1 weighted) of scans. The resulting (multi-echo) images are usually used for quantitative MR imaging. Acquiring MR…

Machine Learning · Computer Science 2019-12-11 Vanika Singhal , Angshul Majumdar

Cardiac Magnetic Resonance (CMR) imaging is a critical tool for diagnosing and managing cardiovascular disease, yet its utility is often limited by the sparse acquisition of 2D short-axis slices, resulting in incomplete volumetric…

Image and Video Processing · Electrical Eng. & Systems 2025-08-22 Niklas Bubeck , Suprosanna Shit , Chen Chen , Can Zhao , Pengfei Guo , Dong Yang , Georg Zitzlsberger , Daguang Xu , Bernhard Kainz , Daniel Rueckert , Jiazhen Pan

Diffusion maps are a commonly used kernel-based method for manifold learning, which can reveal intrinsic structures in data and embed them in low dimensions. However, as with most kernel methods, its implementation requires a heavy…

Machine Learning · Computer Science 2019-12-03 Scott Gigante , Jay S. Stanley , Ngan Vu , David van Dijk , Kevin Moon , Guy Wolf , Smita Krishnaswamy

Diffusion MRI (dMRI) plays a crucial role in studying brain white matter connectivity. Cortical surface reconstruction (CSR), including the inner whiter matter (WM) and outer pial surfaces, is one of the key tasks in dMRI analyses such as…

Tissues and Organs · Quantitative Biology 2025-03-07 Chengjin Li , Yuqian Chen , Nir A. Sochen , Wei Zhang , Carl-Fredrik Westin , Rathi Yogesh , Lauren J. O'Donnell , Ofer Pasternak , Fan Zhang

Deep learning-based dMRI super-resolution methods can effectively enhance image resolution by leveraging the learning capabilities of neural networks on large datasets. However, these methods tend to learn a fixed scale mapping between…

Image and Video Processing · Electrical Eng. & Systems 2024-08-15 Ruoyou Wu , Jian Cheng , Cheng Li , Juan Zou , Jing Yang , Wenxin Fan , Yong Liang , Shanshan Wang

Magnetic Resonance Imaging (MRI) plays a crucial role in brain disease diagnosis, but it is not always feasible for certain patients due to physical or clinical constraints. Recent studies attempt to synthesize MRI from Computed Tomography…

Computer Vision and Pattern Recognition · Computer Science 2026-01-13 Junming Liu , Yifei Sun , Weihua Cheng , Yujin Kang , Yirong Chen , Ding Wang , Guosun Zeng

The complex transverse water proton magnetization subject to diffusion-encoding magnetic field gradient pulses in a heterogeneous medium such as brain tissue can be modeled by the Bloch-Torrey partial differential equation. The spatial…

Numerical Analysis · Mathematics 2020-10-28 Jing-Rebecca Li , Try Nguyen Tran , Van-Dang Nguyen

We introduce a framework that enables efficient sampling from learned probability distributions for MRI reconstruction. Different from conventional deep learning-based MRI reconstruction techniques, samples are drawn from the posterior…

Machine Learning · Computer Science 2023-07-21 Guanxiong Luo , Moritz Blumenthal , Martin Heide , Martin Uecker

We present a microstructure imaging technique for estimating compartment-specific T2 and T2* simultaneously in the human brain. Microstructure imaging with diffusion MRI (dMRI) has enabled the modelling of intra-neurite and extra-neurite…

Medical Physics · Physics 2024-08-21 Ting Gong , Merlin J. Fair , Kawin Setsompop , Hui Zhang

In this work, we propose a simple kernel ridge regression (KRR) framework with a dynamic-aware validation strategy for long-term prediction of complex dynamical systems. By employing a data-driven kernel derived from diffusion maps, the…

Machine Learning · Computer Science 2025-12-30 Jiwoo Song , Daning Huang , John Harlim

We propose a multimodal latent diffusion model that jointly synthesizes volumetric magnetic resonance imaging (MRI) and tabular clinical data within a shared latent space via cross-attention. This approach enables coherent joint…

Image and Video Processing · Electrical Eng. & Systems 2026-05-11 Daniel Mensing , Jan Kapar , Jochen G. Hirsch , Matthias Günther , Horst Hahn , Marvin N. Wright

Understanding the structure of the heart at the microscopic scale of cardiomyocytes and their aggregates provides new insights into the mechanisms of heart disease and enables the investigation of effective therapeutics. Diffusion Tensor…

Tissue microstructure has significance as a biomarker, however its accurate inference with diffusion magnetic resonance (MR) is still an open problem. With few exceptions, diffusion weighted (DW) MR models either process diffusion MR data…

Medical Physics · Physics 2019-08-20 Alpay Özcan

Compressed sensing (CS) demonstrates that sparse signals can be estimated from under-determined linear systems. Distributed CS (DCS) further reduces the number of measurements by considering joint sparsity within signal ensembles. DCS with…

Information Theory · Computer Science 2017-03-24 Junan Zhu , Dror Baron , Florent Krzakala

We propose a new computer aided detection framework for tumours acquired on DCE-MRI (Dynamic Contrast Enhanced Magnetic Resonance Imaging) series on small animals. In this approach we consider DCE-MRI series as multivariate images. A full…

Image and Video Processing · Electrical Eng. & Systems 2019-10-29 Guillaume Noyel , Jesus Angulo , Dominique Jeulin , Daniel Balvay , Charles-André Cuenod

This paper presents DFR (Decompose, Fuse and Reconstruct), a novel framework that addresses the fundamental challenge of effectively utilizing multi-modal guidance in few-shot segmentation (FSS). While existing approaches primarily rely on…

Computer Vision and Pattern Recognition · Computer Science 2025-07-23 Shuai Chen , Fanman Meng , Xiwei Zhang , Haoran Wei , Chenhao Wu , Qingbo Wu , Hongliang Li

Diffusion-attenuated MR signal for heterogeneous media has been represented as a sum of signals from anisotropic Gaussian sub-domains. Any effect of macroscopic (global or ensemble) anisotropy in the signal can be removed by averaging the…

Applied Physics · Physics 2020-01-03 Magnus Herberthson , Cem Yolcu , Hans Knutsson , Carl-Fredrik Westin , Evren Özarslan

We propose a novel numerical approach to separate multiple tissue compartments in image voxels and to estimate quantitatively their nuclear magnetic resonance (NMR) properties and mixture fractions, given magnetic resonance fingerprinting…

Computer Vision and Pattern Recognition · Computer Science 2020-11-24 Mohammad Golbabaee , Clarice Poon

We consider the NMR signal from a permeable medium with a heterogeneous Larmor frequency component that varies on a scale comparable to the spin-carrier diffusion length. We focus on the mesoscopic part of the transverse relaxation, that…

Mesoscale and Nanoscale Physics · Physics 2008-10-23 D. S. Novikov , V. G. Kiselev