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Recent experiments have shown that the capacity of DNA storage systems may be significantly increased by synthesizing composite DNA letters. In this work, we model a DNA storage channel with composite inputs as a \textit{multinomial…

Information Theory · Computer Science 2025-01-28 Adir Kobovich , Eitan Yaakobi , Nir Weinberger

DNA data storage offers a high-density, long-term alternative to traditional storage systems, addressing the exponential growth of digital data. Composite DNA extends this paradigm by leveraging mixtures of nucleotides to increase storage…

Information Theory · Computer Science 2026-02-13 Busra Tegin , Tolga M Duman

DNA exhibits remarkable potential as a data storage solution due to its impressive storage density and long-term stability, stemming from its inherent biomolecular structure. However, developing this novel medium comes with its own set of…

Image and Video Processing · Electrical Eng. & Systems 2023-09-14 Trung Hieu Le , Xavier Pic , Jeremy Mateos , Marc Antonini

Hybrid analog and digital beamforming transceivers are instrumental in addressing the challenge of expensive hardware and high training overheads in the next generation millimeter-wave (mm-Wave) massive MIMO (multiple-input multiple-output)…

Signal Processing · Electrical Eng. & Systems 2022-01-04 Ahmet M. Elbir , Kumar Vijay Mishra , M. R. Bhavani Shankar , Björn Ottersten

Modern optimization problems in scientific and engineering domains often rely on expensive black-box evaluations, such as those arising in physical simulations or deep learning pipelines, where gradient information is unavailable or…

Computation · Statistics 2026-01-05 Foo Hui-Mean , Yuan-chin Ivan Chang

We present a distributed generic algorithm called DAMS dedicated to adaptive optimization in distributed environments. Given a set of metaheuristic, the goal of DAMS is to coordinate their local execution on distributed nodes in order to…

Neural and Evolutionary Computing · Computer Science 2012-07-19 Bilel Derbel , Sébastien Verel

Technologies for sequencing (reading) and synthesizing (writing) DNA have progressed on a Moore's law-like trajectory over the last three decades. This has motivated the idea of using DNA for data storage. Theoretically, DNA-based storage…

Emerging Technologies · Computer Science 2023-07-07 Ajay Manicka , Andrew Stephan , Sriram Chari , Gemma Mendonsa , Peyton Okubo , John Stolzberg-Schray , Anil Reddy , Marc Riedel

Diffusion alignment aims to optimize diffusion models for the downstream objective. While existing methods based on reinforcement learning or direct backpropagation achieve considerable success in maximizing rewards, they often suffer from…

Machine Learning · Computer Science 2026-03-09 Jaewoo Lee , Minsu Kim , Sanghyeok Choi , Inhyuck Song , Sujin Yun , Hyeongyu Kang , Woocheol Shin , Taeyoung Yun , Kiyoung Om , Jinkyoo Park

In the current era, DeoxyriboNucleic Acid (DNA) based data storage emerges as an intriguing approach, garnering substantial academic interest and investigation. This paper introduces a novel deep joint source-channel coding (DJSCC) scheme…

Emerging Technologies · Computer Science 2023-11-03 Wenfeng Wu , Luping Xiang , Qiang Liu , Kun Yang

We consider error-correcting coding for DNA-based storage. We model the DNA storage channel as a multi-draw IDS channel where the input data is chunked into $M$ short DNA strands, which are copied a random number of times, and the channel…

Information Theory · Computer Science 2023-06-22 Lorenz Welter , Issam Maarouf , Andreas Lenz , Antonia Wachter-Zeh , Eirik Rosnes , Alexandre Graell i Amat

We consider distributed channel access in multi-hop cognitive radio networks. Previous works on opportunistic channel access using multi-armed bandits (MAB) mainly focus on single-hop networks that assume complete conflicts among all…

Networking and Internet Architecture · Computer Science 2013-08-23 Yaqin Zhou , Xiang-yang Li , Fan Li , Min Liu , Zhongcheng Li , Zhiyuan Yin

By allowing a large number of links to be simultaneously transmitted, directional antenna arrays with beamforming have been envisioned as a promising candidate to reach unprecedented levels of spatial isolation. To achieve the high…

Information Theory · Computer Science 2019-01-16 Yilin Li , Jian Luo , Richard A. Stirling-Gallacher , Giuseppe Caire

Composite DNA is a recent novel method to increase the information capacity of DNA-based data storage above the theoretical limit of 2 bits/symbol. In this method, every composite symbol does not store a single DNA nucleotide but a mixture…

Information Theory · Computer Science 2025-01-22 Tuan Thanh Nguyen , Chen Wang , Kui Cai , Yiwei Zhang , Zohar Yakhini

This paper presents a novel distributed robust optimization scheme for steering distributions of multi-agent systems under stochastic and deterministic uncertainty. Robust optimization is a subfield of optimization which aims to discover an…

Robotics · Computer Science 2025-01-31 Arshiya Taj Abdul , Augustinos D. Saravanos , Evangelos A. Theodorou

We provide an overview of current approaches to DNA-based storage system design and accompanying synthesis, sequencing and editing methods. We also introduce and analyze a suite of new constrained coding schemes for both archival and random…

Emerging Technologies · Computer Science 2015-07-08 S. M. Hossein Tabatabaei Yazdi , Han Mao Kiah , Eva Ruiz Garcia , Jian Ma , Huimin Zhao , Olgica Milenkovic

Multicasting is an efficient technique for simultaneously transmitting common messages from the base station (BS) to multiple mobile users (MUs). Multicast scheduling over multiple channels, which aims to jointly minimize the energy…

Information Theory · Computer Science 2023-08-22 Ran Li , Chuan Huang , Xiaoqi Qin , Shengpei Jiang

This paper studies the transmit antenna selection in massive multiple-input multiple-output (MIMO) system over wiretap channel. The transmitter, equipped with a large-scale antenna array whose size is much larger than that of the…

Signal Processing · Electrical Eng. & Systems 2019-01-23 Chongjun Ouyang , Zeliang Ou , Hongwen Yang

Due to the low per-antenna SNR and high signaling overhead, channel estimation is a major bottleneck in Massive MIMO systems. Spatial constraints can improve estimation performance by exploiting sparsity. Solutions exist for far field -…

Information Theory · Computer Science 2017-12-21 Arkady Molev-Shteiman , Laurence Mailaender , Xiao-Feng Qi

In realistic distributed optimization scenarios, individual nodes possess only partial information and communicate over bandwidth constrained channels. For this reason, the development of efficient distributed algorithms is essential. In…

Systems and Control · Electrical Eng. & Systems 2024-10-21 Apostolos I. Rikos , Wei Jiang , Themistoklis Charalambous , Karl H. Johansson

We consider error-correcting coding for deoxyribonucleic acid (DNA)-based storage using nanopore sequencing. We model the DNA storage channel as a sampling noise channel where the input data is chunked into $M$ short DNA strands, which are…

Information Theory · Computer Science 2024-06-21 Lorenz Welter , Roman Sokolovskii , Thomas Heinis , Antonia Wachter-Zeh , Eirik Rosnes , Alexandre Graell i Amat
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