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Classical molecular dynamics (MD) simulations are important tools in life and material sciences since they allow studying chemical and biological processes in detail. However, the inherent scalability problem of particle-particle…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-08-14 Michael Schaffner , Luca Benini

High parallel framework has been proved to be very suitable for graph processing. There are various work to optimize the implementation in FPGAs, a pipeline parallel device. The key to make use of the parallel performance of FPGAs is to…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-07-02 Chengbo Yang

Mixed-precision algorithms have been proposed as a way for scientific computing to benefit from some of the gains seen for artificial intelligence (AI) on recent high performance computing (HPC) platforms. A few applications dominated by…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-07-16 Aditya Kashi , Nicholson Koukpaizan , Hao Lu , Michael Matheson , Sarp Oral , Feiyi Wang

Images when processed using various enhancement techniques often lead to edge degradation and other unwanted artifacts such as halos. These artifacts pose a major problem for photographic applications where they can denude the quality of an…

Image and Video Processing · Electrical Eng. & Systems 2024-02-21 Shashwat Khandelwal , Ziaul Choudhury , Shashwat Shrivastava , Suresh Purini

Particle-in-cell simulations are among the most essential tools for the modeling and optimization of laser-plasma accelerators, since they reproduce the physics from first principles. However, the high computational cost associated with…

At the Large Hadron Collider, the vast amount of data from experiments demands not only sophisticated algorithms but also substantial computational power for efficient processing. This paper introduces hardware acceleration as an essential…

High Energy Physics - Experiment · Physics 2025-01-15 Pelayo Leguina López , Santiago Folgueras

Plasma-based acceleration (PBA) has emerged as a promising candidate for the accelerator technology used to build a future linear collider and/or an advanced light source. In PBA, a trailing or witness particle beam is accelerated in the…

Plasma Physics · Physics 2024-05-03 Q. Su , F. Li , W. An , V. Decyk , Y. Zhao , L. Hildebrand , T. N. Dalichaouch , S. Zhou , E. P. Alves , A. S. Almgren , W. B. Mori

Hybrid memory systems, comprised of emerging non-volatile memory (NVM) and DRAM, have been proposed to address the growing memory demand of applications. Emerging NVM technologies, such as phase-change memories (PCM), memristor, and 3D…

Hardware Architecture · Computer Science 2024-03-19 Fei Wen , Mian Qin , Paul V. Gratz , A. L. Narasimha Reddy

Large-scale HPC simulations of plasma dynamics in fusion devices require efficient parallel I/O to avoid slowing down the simulation and to enable the post-processing of critical information. Such complex simulations lacking parallel I/O…

Over the past few years, there has been an increased interest in including FPGAs in data centers and high-performance computing clusters along with GPUs and other accelerators. As a result, it has become increasingly important to have a…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-09-14 Mostafa Eghbali Zarch , Reece Neff , Michela Becchi

Convolutional neural network (CNN) dataflow inference accelerators implemented in Field Programmable Gate Arrays (FPGAs) have demonstrated increased energy efficiency and lower latency compared to CNN execution on CPUs or GPUs. However, the…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-03-30 Mairin Kroes , Lucian Petrica , Sorin Cotofana , Michaela Blott

This work introduces CLBlast, an open-source BLAS library providing optimized OpenCL routines to accelerate dense linear algebra for a wide variety of devices. It is targeted at machine learning and HPC applications and thus provides a fast…

Mathematical Software · Computer Science 2018-04-30 Cedric Nugteren

While FPGAs have been used extensively as hardware accelerators in industrial computation, no theoretical model of computation has been devised for the study of FPGA-based accelerators. In this paper, we present a theoretical model of…

Data Structures and Algorithms · Computer Science 2018-11-19 Martin Hora , Václav Končický , Jakub Tětek

Particle accelerators are among the largest, most complex devices. To meet the challenges of increasing energy, intensity, accuracy, compactness, complexity and efficiency, increasingly sophisticated computational tools are required for…

Accelerator Physics · Physics 2023-01-13 Axel Huebl , Remi Lehe , Chad E. Mitchell , Ji Qiang , Robert D. Ryne , Ryan T. Sandberg , Jean-Luc Vay

With the increasing demand for computing capability given limited resource and power budgets, it is crucial to deploy applications to customized accelerators like FPGAs. However, FPGA programming is non-trivial. Although existing high-level…

Hardware Architecture · Computer Science 2024-01-11 Weichuang Zhang , Jieru Zhao , Guan Shen , Quan Chen , Chen Chen , Minyi Guo

Molecular similarity search has been widely used in drug discovery to identify structurally similar compounds from large molecular databases rapidly. With the increasing size of chemical libraries, there is growing interest in the efficient…

Hardware Architecture · Computer Science 2021-09-15 Hongwu Peng , Shiyang Chen , Zhepeng Wang , Junhuan Yang , Scott A. Weitze , Tong Geng , Ang Li , Jinbo Bi , Minghu Song , Weiwen Jiang , Hang Liu , Caiwen Ding

RISC-V allows for building general-purpose computing platforms with programmable accelerators around a single open-source ISA. However, leveraging heterogeneous SoCs within high-level applications is a tedious task. In this preliminary…

Hardware Architecture · Computer Science 2025-04-08 Cyril Koenig , Enrico Zelioli , Frank K. Gürkaynak , Luca Benini

We present the basic idea, implementation, measured performance and performance model of FDPS (Framework for developing particle simulators). FDPS is an application-development framework which helps the researchers to develop particle-based…

Instrumentation and Methods for Astrophysics · Physics 2016-06-15 Masaki Iwasawa , Ataru Tanikawa , Natsuki Hosono , Keigo Nitadori , Takayuki Muranushi , Junichiro Makino

An efficient hardware implementation for Simultaneous Localization and Mapping (SLAM) methods is of necessity for mobile autonomous robots with limited computational resources. In this paper, we propose a resource-efficient FPGA…

Signal Processing · Electrical Eng. & Systems 2023-05-31 Keisuke Sugiura , Hiroki Matsutani

Path planning is critical for autonomous driving, generating smooth, collision-free, feasible paths based on perception and localization inputs. However, its computationally intensive nature poses significant challenges for…

Hardware Architecture · Computer Science 2025-07-23 Yifan Zhang , Xiaoyu Niu , Hongzheng Tian , Yanjun Zhang , Bo Yu , Shaoshan Liu , Sitao Huang