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Nonlinear dimensionality reduction techniques, particularly UMAP, are widely used for visualizing high-dimensional data. However, UMAP's local Euclidean distance assumption often fails to capture intrinsic manifold geometry, leading to…

Machine Learning · Computer Science 2026-01-26 Xiaobin Li , Run Zhang

Mapper graphs are widely used tools in topological data analysis and visualization. They can be understood as discrete approximations of Reeb graphs, providing insight into the shape and connectivity of complex data. Given a…

Computational Geometry · Computer Science 2026-04-17 Erin Wolf Chambers , Ishika Ghosh , Elizabeth Munch , Sarah Percival , Bei Wang

We consider the problem of probabilistic forecasting over categories with graph structure, where the dynamics at a vertex depends on its local connectivity structure. We present GOPHER, a method that combines the inductive bias of graph…

Machine Learning · Computer Science 2021-12-21 Ke Alexander Wang , Danielle Maddix , Yuyang Wang

This paper introduces a real-time algorithm for navigating complex unknown environments cluttered with movable obstacles. Our algorithm achieves fast, adaptable routing by actively attempting to manipulate obstacles during path planning and…

Robotics · Computer Science 2024-04-12 Botao He , Guofei Chen , Wenshan Wang , Ji Zhang , Cornelia Fermuller , Yiannis Aloimonos

Given an unknown $n \times n$ matrix $A$ having non-negative entries, the \emph{inner product} (IP) oracle takes as inputs a specified row (or a column) of $A$ and a vector $v \in \mathbb{R}^{n}$, and returns their inner product. A…

Computational Complexity · Computer Science 2022-02-22 Arijit Bishnu , Arijit Ghosh , Gopinath Mishra , Manaswi Paraashar

Graph coarsening is a graph dimensionality reduction technique that aims to construct a smaller and more tractable graph while preserving the essential structural and semantic properties of the original graph. However, most existing methods…

Machine Learning · Computer Science 2026-05-14 Xu Bai , Bin Lu , Kun Zhang , Shengbo Chen , Xinbing Wang , Chenghu Zhou , Meng Jin

Despite the recent success of graph neural networks (GNN), common architectures often exhibit significant limitations, including sensitivity to oversmoothing, long-range dependencies, and spurious edges, e.g., as can occur as a result of…

Machine Learning · Computer Science 2021-12-06 Yongyi Yang , Tang Liu , Yangkun Wang , Jinjing Zhou , Quan Gan , Zhewei Wei , Zheng Zhang , Zengfeng Huang , David Wipf

Direct Preference Optimization (DPO) aligns language models using pairwise preference comparisons, offering a simple and effective alternative to Reinforcement Learning (RL) from human feedback. However, in many practical settings, training…

Machine Learning · Computer Science 2026-05-11 Ning Liu , Chuanneng Sun , Kristina Klinkner , Shervin Malmasi

Query evaluation over probabilistic databases is notoriously intractable -- not only in combined complexity, but often in data complexity as well. This motivates the study of approximation algorithms, and particularly of combined FPRASes,…

Databases · Computer Science 2025-12-17 Antoine Amarilli , Timothy van Bremen , Octave Gaspard , Kuldeep S. Meel

This paper investigates the feasibility of achieving zero-knowledge verifiability for graph databases, enabling database owners to cryptographically prove the query execution correctness without disclosing the underlying data. Although…

Databases · Computer Science 2025-07-02 Hao Wu , Changzheng Wei , Yanhao Wang , Li Lin , Yilong Leng , Shiyu He , Minghao Zhao , Hanghang Wu , Ying Yan , Aoying Zhou

The Open Research Knowledge Graph (ORKG) provides machine-actionable access to scholarly literature that habitually is written in prose. Following the FAIR principles, the ORKG makes traditional, human-coded knowledge findable, accessible,…

Digital Libraries · Computer Science 2020-06-25 Mila Runnwerth , Markus Stocker , Sören Auer

Efficient computation of node proximity queries such as transition probabilities, Personalized PageRank, and Katz are of fundamental importance in various graph mining and learning tasks. In particular, several recent works leverage fast…

Data Structures and Algorithms · Computer Science 2021-11-29 Hanzhi Wang , Mingguo He , Zhewei Wei , Sibo Wang , Ye Yuan , Xiaoyong Du , Ji-Rong Wen

Establishing the correspondences between newly acquired points and historically accumulated data (i.e., map) through nearest neighbors search is crucial in numerous robotic applications. However, static tree data structures are inadequate…

Robotics · Computer Science 2024-03-01 Jun Zhu , Hongyi Li , Zhepeng Wang , Shengjie Wang , Tao Zhang

Drug discovery often relies on the successful prediction of protein-ligand binding affinity. Recent advances have shown great promise in applying graph neural networks (GNNs) for better affinity prediction by learning the representations of…

Quantitative Methods · Quantitative Biology 2021-07-24 Shuangli Li , Jingbo Zhou , Tong Xu , Liang Huang , Fan Wang , Haoyi Xiong , Weili Huang , Dejing Dou , Hui Xiong

Let $s$ denote a distinguished source vertex of a non-negatively real weighted and undirected graph $G$ with $n$ vertices and $m$ edges. In this paper we present two efficient \emph{single-source approximate-distance sensitivity oracles},…

Data Structures and Algorithms · Computer Science 2016-08-18 Davide Bilò , Luciano Gualà , Stefano Leucci , Guido Proietti

Computing the diameter of a graph is a problem of great interest both in general algorithms research and specifically within fine-grained complexity, where it is a cornerstone hard problem. Recent work has achieved a full conditional lower…

Data Structures and Algorithms · Computer Science 2026-05-01 Yael Kirkpatrick , Liam Roditty , Richard Qi , Virginia Vassilevska Williams

Graphs are essential for modeling complex relationships and capturing structured interactions in data. Graph Neural Networks (GNNs) are particularly effective when such relational structure is explicitly available, but many real-world…

Graphics · Computer Science 2026-03-02 Haozhe Chen , Soheila Farokhi , Kelvyn Bladen , Hamid Karimi , Kevin R. Moon

Graphons are continuous models that represent the structure of graphs and allow the generation of graphs of varying sizes. We propose Scalable Implicit Graphon Learning (SIGL), a scalable method that combines implicit neural representations…

Machine Learning · Statistics 2025-05-23 Ali Azizpour , Nicolas Zilberstein , Santiago Segarra

Motivated by experiments confirming that the optical transparency of graphene is defined through the fine structure constant and that it could be fully explained within the relativistic Dirac fermions in 2D picture, in this article we…

Strongly Correlated Electrons · Physics 2018-11-28 Horacio Falomir , Marcelo Loewe , Enrique Muñoz , Alfredo Raya

Coordination graph is a promising approach to model agent collaboration in multi-agent reinforcement learning. It conducts a graph-based value factorization and induces explicit coordination among agents to complete complicated tasks.…

Machine Learning · Computer Science 2022-09-20 Qianlan Yang , Weijun Dong , Zhizhou Ren , Jianhao Wang , Tonghan Wang , Chongjie Zhang