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Accurate multi-organ segmentation in abdominal CT scans is essential for computer-aided diagnosis and treatment. While convolutional neural networks (CNNs) have long been the standard approach in medical image segmentation,…

Computer Vision and Pattern Recognition · Computer Science 2026-03-20 Lukas Bayer , Sheethal Bhat , Andreas Maier

Background: By a new concept called "phase diagram", we compare two commonly used genotype-based tests for case-control genetic analysis, one is a Cochran-Armitage trend test (CAT test at $x=0.5$, or CAT0.5) and another (called MAX2) is the…

Populations and Evolution · Quantitative Biology 2009-11-09 Wentian Li , Young Ju Suh , Yaning Yang

The rapidly emerging field of deep learning-based computational pathology has shown promising results in utilizing whole slide images (WSIs) to objectively prognosticate cancer patients. However, most prognostic methods are currently…

Computer Vision and Pattern Recognition · Computer Science 2023-11-21 Mingxin Liu , Yunzan Liu , Hui Cui , Chunquan Li , Jiquan Ma

Early detection of cancer and cardiovascular diseases is fundamental to improving patient outcomes and reducing healthcare expenditure. Current cancer screening programs are targeted towards specific cancers and are often inaccessible to…

Other Quantitative Biology · Quantitative Biology 2025-11-20 Lo Kai Shun John , Riya Nagar , Abicumaran Uthamacumaran , Hector Zenil

Purpose: Identifying intravenous (IV) contrast use within CT scans is a key component of data curation for model development and testing. Currently, IV contrast is poorly documented in imaging metadata and necessitates manual correction and…

Image and Video Processing · Electrical Eng. & Systems 2021-10-22 Zezhong Ye , Jack M. Qian , Ahmed Hosny , Roman Zeleznik , Deborah Plana , Jirapat Likitlersuang , Zhongyi Zhang , Raymond H. Mak , Hugo J. W. L. Aerts , Benjamin H. Kann

Prognostication for comatose post-cardiac arrest patients is a critical challenge that directly impacts clinical decision-making in the ICU. Clinical information that informs prognostication is collected serially over time. Shortly after…

Machine Learning · Computer Science 2025-08-11 Xiaobin Shen , Jonathan Elmer , George H. Chen

Versatile medical image segmentation (VMIS) targets the segmentation of multiple classes, while obtaining full annotations for all classes is often impractical due to the time and labor required. Leveraging partially labeled datasets (PLDs)…

Computer Vision and Pattern Recognition · Computer Science 2025-09-08 Shengqian Zhu , Jiafei Wu , Xiaogang Xu , Chengrong Yu , Ying Song , Zhang Yi , Guangjun Li , Junjie Hu

Background: While intravascular imaging, particularly optical coherence tomography (OCT), improves percutaneous coronary intervention (PCI) outcomes, its interpretation is operator-dependent. General-purpose artificial intelligence (AI)…

Numerous oncology indications have extensively quantified metabolically active tumors using positron emission tomography (PET) and computed tomography (CT). F-fluorodeoxyglucose-positron emission tomography (FDG-PET) is frequently utilized…

Image and Video Processing · Electrical Eng. & Systems 2022-10-17 Sepideh Amiri , Bulat Ibragimov

Purpose: The distribution of visceral adipose tissue (VAT) in cystectomy patients is indicative of the incidence of post-operative complications. Existing VAT segmentation methods for computed tomography (CT) employing intensity…

Image and Video Processing · Electrical Eng. & Systems 2025-05-13 Thomas Boucher , Nicholas Tetlow , Annie Fung , Amy Dewar , Pietro Arina , Sven Kerneis , John Whittle , Evangelos B. Mazomenos

Citrus, as one of the most economically important fruit crops globally, suffers severe yield depressions due to various diseases. Accurate disease detection and classification serve as critical prerequisites for implementing targeted…

Computer Vision and Pattern Recognition · Computer Science 2025-07-16 Jun Chen , Yonghua Yu , Weifu Li , Yaohui Chen , Hong Chen

Multi-organ segmentation in whole-body computed tomography (CT) is a constant pre-processing step which finds its application in organ-specific image retrieval, radiotherapy planning, and interventional image analysis. We address this…

Computer Vision and Pattern Recognition · Computer Science 2019-08-15 Fernando Navarro , Suprosanna Shit , Ivan Ezhov , Johannes Paetzold , Andrei Gafita , Jan Peeken , Stephanie Combs , Bjoern Menze

Many lung diseases require detailed visualisation for accurate diagnosis and treatment. High-resolution computed tomography (CT) is the gold-standard technique for non-invasive lung disease detection, but it presents a risk to the patient…

Different CT segmentation datasets are typically obtained from different scanners under different capture settings and often provide segmentation labels for a limited and often disjoint set of organs. Using these heterogeneous data…

Image and Video Processing · Electrical Eng. & Systems 2025-08-14 Asim Ukaye , Numan Saeed , Karthik Nandakumar

Coronary CT angiography (CCTA) has established its role as a non-invasive modality for the diagnosis of coronary artery disease (CAD). The CAD-Reporting and Data System (CAD-RADS) has been developed to standardize communication and aid in…

Chronic Kidney Disease (CKD) is one of the widespread Chronic diseases with no known ultimo cure and high morbidity. Research demonstrates that progressive Chronic Kidney Disease (CKD) is a heterogeneous disorder that significantly impacts…

Machine Learning · Computer Science 2025-01-28 K M Tawsik Jawad , Anusha Verma , Fathi Amsaad , Lamia Ashraf

Inter reader variability and cross site domain shift challenge the automatic segmentation of prostate anatomy using T2 weighted MRI images. This study investigates whether transformer models can retain precision amid such heterogeneity. We…

Image and Video Processing · Electrical Eng. & Systems 2026-04-23 Shatha Abudalou , Jung Choi , Yasin Yilmaz , Yoganand Balagurunathan

Chest X-rays have been widely used for COVID-19 screening; however, 3D computed tomography (CT) is a more effective modality. We present our findings on COVID-19 severity prediction from chest CT scans using the STOIC dataset. We developed…

Image and Video Processing · Electrical Eng. & Systems 2023-05-18 Sidra Aleem , Mayug Maniparambil , Suzanne Little , Noel O'Connor , Kevin McGuinness

In this work, we address the challenge of binary lung nodule classification (benign vs malignant) using CT images by proposing a multi-level attention stacked ensemble of deep neural networks. Three pretrained backbones -- EfficientNet V2…

Image and Video Processing · Electrical Eng. & Systems 2025-07-29 Uzzal Saha , Surya Prakash

Multi-phase computed tomography (CT) scans use contrast agents to highlight different anatomical structures within the body to improve the probability of identifying and detecting anatomical structures of interest and abnormalities such as…

Image and Video Processing · Electrical Eng. & Systems 2024-04-18 Abdullah F. Al-Battal , Soan T. M. Duong , Van Ha Tang , Quang Duc Tran , Steven Q. H. Truong , Chien Phan , Truong Q. Nguyen , Cheolhong An