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In the realm of big data and digital healthcare, Electronic Health Records (EHR) have become a rich source of information with the potential to improve patient care and medical research. In recent years, machine learning models have…

Machine Learning · Computer Science 2024-10-10 Suhan Cui , Prasenjit Mitra

Screening patients for clinical trial eligibility remains a manual, time-consuming, and resource-intensive process. We present a secure, scalable proof-of-concept system for Artificial Intelligence (AI)-augmented patient-trial matching that…

Public research results on large-scale supervised finetuning of AI agents remain relatively rare, since the collection of agent training data presents unique challenges. In this work, we argue that the bottleneck is not a lack of underlying…

In the evolving landscape of neural network models, one prominent challenge stand out: the significant memory overheads associated with training expansive models. Addressing this challenge, this study delves deep into the Rotated Tensor…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-11-06 Cheng Luo , Tianle Zhong , Geoffrey Fox

Planning safe paths in 3D workspace for high DoF robotic systems, such as manipulators, is a challenging problem, especially when the environment is populated with the dynamic obstacles that need to be avoided. In this case the time…

Robotics · Computer Science 2025-01-20 Nuraddin Kerimov , Aleksandr Onegin , Konstantin Yakovlev

Reverse time migration (RTM) is an algorithm widely used in the oil and gas industry to process seismic data. It is a computationally intensive task that suits well in parallel computers. Methods such as RTM can be parallelized in shared…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-08-14 Ítalo A. S. Assis , João B. Fernandes , Tiago Barros , Samuel Xavier-de-Souza

Radiotherapy is a crucial cancer treatment that demands precise planning to balance tumor eradication and preservation of healthy tissue. Traditional treatment planning (TP) is iterative, time-consuming, and reliant on human expertise,…

Machine Learning · Computer Science 2025-02-10 Matteo Ferrante , Alessandra Carosi , Rolando Maria D Angelillo , Nicola Toschi

A toolkit for interacting with the Elekta Monaco (Clements et al 2018) treatment planning system (TPS) has been designed without the need of a dedicated Application Programming Interface (API). It provides automatization of the radiotherapy…

Medical Physics · Physics 2019-05-07 Rafael Ayala , Gema Ruiz , Teresa Valdivielso

Recent advancements in QA with LLM, like GPT-4, have shown limitations in handling complex multi-hop queries. We propose AT-RAG, a novel multistep RAG incorporating topic modeling for efficient document retrieval and reasoning. Using…

Computation and Language · Computer Science 2024-10-18 Mohammad Reza Rezaei , Maziar Hafezi , Amit Satpathy , Lovell Hodge , Ebrahim Pourjafari

Intensity-modulated radiation therapy (IMRT) allows for the design of customized, highly-conformal treatments for cancer patients. Creating IMRT treatment plans, however, is a mathematically complex process, which is often tackled in…

Optimization and Control · Mathematics 2022-03-18 Danielle A. Ripsman , Thomas G. Purdie , Timothy C. Y. Chan , Houra Mahmoudzadeh

While the efficacy of deep learning models heavily relies on data, gathering and annotating data for specific tasks, particularly when addressing novel or sensitive subjects lacking relevant datasets, poses significant time and resource…

Computer Vision and Pattern Recognition · Computer Science 2025-06-25 Quang-Binh Nguyen , Trong-Vu Hoang , Ngoc-Do Tran , Tam V. Nguyen , Minh-Triet Tran , Trung-Nghia Le

Finding high-quality solutions quickly is an important objective in motion planning. This is especially true for high-degree-of-freedom robots. Satisficing planners have traditionally found feasible solutions quickly but provide no…

Robotics · Computer Science 2025-12-29 Tyler Wilson , Wil Thomason , Zachary Kingston , Jonathan Gammell

Automatic program repair (APR) aims to reduce the manual efforts required to identify and fix errors in source code. Before the rise of LLM-based agents, a common strategy was to increase the number of generated patches, sometimes to the…

Software Engineering · Computer Science 2025-05-07 Fernando Vallecillos Ruiz , Max Hort , Leon Moonen

Technological advances in artificial intelligence (AI) have enabled the development of large vision language models (LVLMs) that are trained on millions of paired image and text samples. Subsequent research efforts have demonstrated great…

Computation and Language · Computer Science 2024-11-28 Kalina P. Slavkova , Melanie Traughber , Oliver Chen , Robert Bakos , Shayna Goldstein , Dan Harms , Bradley J. Erickson , Khan M. Siddiqui

Stereotactic radiosurgery (SRS) demands precise dose shaping around critical structures, yet black-box AI systems have limited clinical adoption due to opacity concerns. We tested whether chain-of-thought reasoning improves agentic planning…

AI tasks encompass a wide range of domains and fields. While numerous AI models have been designed for specific tasks and applications, they often require considerable human efforts in finding the right model architecture, optimization…

Computation and Language · Computer Science 2023-05-05 Shujian Zhang , Chengyue Gong , Lemeng Wu , Xingchao Liu , Mingyuan Zhou

Radiation Therapy (RT) plays a pivotal role in the treatment of cancer, offering the potential to effectively target and eliminate tumour cells while minimizing harm to surrounding healthy tissues. However, the success of RT heavily depends…

Medical Physics · Physics 2024-02-16 Keshav Kumar K. , NVSL Narasimham , A. Ramakrishna Prasad

Radiotherapy represents an important phase of treatment for a large number of cancer patients. It is essential that resources used to deliver this treatment are employed effectively. This paper presents a new integer linear programming…

Computational Engineering, Finance, and Science · Computer Science 2011-03-18 Edmund K. Burke , Pedro Leite-Rocha , Sanja Petrovic

Training data attribution (TDA) methods aim to measure how training data impacts a model's predictions. While gradient-based attribution methods, such as influence functions, offer theoretical grounding, their computational costs make them…

Machine Learning · Computer Science 2025-11-27 Weiwei Sun , Haokun Liu , Nikhil Kandpal , Colin Raffel , Yiming Yang

A central problem in the field of radiation therapy (RT) is how to optimally deliver dose to a patient in a way that fully accounts for anatomical position changes over time. As current RT is a static process, where beam intensities are…

Medical Physics · Physics 2019-09-04 Rodney D. Wiersma , Xinmin Liu