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A significant amount of research is focused on developing and evaluating large language models for a variety of code synthesis tasks. These include synthesizing code from natural language, synthesizing tests from code, and synthesizing…

In software development environments, code quality is crucial. This study aims to assist Machine Learning (ML) engineers in enhancing their code by identifying and correcting Data Leakage issues within their models. Data Leakage occurs when…

Software Engineering · Computer Science 2025-09-22 Owen Truong , Terrence Zhang , Arnav Marchareddy , Ryan Lee , Jeffery Busold , Michael Socas , Eman Abdullah AlOmar

Computational notebooks have become popular for Exploratory Data Analysis (EDA), augmented by LLM-based code generation and result interpretation. Effective LLM assistance hinges on selecting informative context -- the minimal set of cells…

Human-Computer Interaction · Computer Science 2025-11-11 Mohammad Hasan Payandeh , Lin-Ping Yuan , Jian Zhao

Interactive computational notebooks (e.g., Jupyter notebooks) are widely used in machine learning engineering (MLE) to program and share end-to-end pipelines, from data preparation to model training and evaluation. However, environment…

Software Engineering · Computer Science 2026-02-10 Bihui Jin , Kaiyuan Wang , Pengyu Nie

Instructed code editing, where LLMs directly modify a developer's existing code based on a user instruction, is becoming a widely used interaction mode in AI coding assistants. However, few benchmarks directly evaluate this capability and…

Recent years have seen the development of LLM-based code generation. Compared to generating code in a software project, incremental code edits are empirically observed to be more frequent. The emerging code editing approaches usually…

Software Engineering · Computer Science 2024-08-06 Chenyan Liu , Yufan Cai , Yun Lin , Yuhuan Huang , Yunrui Pei , Bo Jiang , Ping Yang , Jin Song Dong , Hong Mei

Large language models (LLMs) have played a pivotal role in building communicative AI, yet they encounter the challenge of efficient updates. Model editing enables the manipulation of specific knowledge memories and the behavior of language…

Computation and Language · Computer Science 2024-10-28 Xinbei Ma , Tianjie Ju , Jiyang Qiu , Zhuosheng Zhang , Hai Zhao , Lifeng Liu , Yulong Wang

Computational notebooks are the primary coding tools for data scientists, but their code quality remains understudied and often poor. Given the importance of maintainability and reusability, enhancing code understandability is essential.…

Software Engineering · Computer Science 2025-06-19 Mojtaba Mostafavi Ghahfarokhi , Alireza Asadi , Arash Asgari , Bardia Mohammadi , Abbas Heydarnoori , Masih Beigi Rizi

AI-powered code assistants, such as Copilot, are quickly becoming a ubiquitous component of contemporary coding contexts. Among these environments, computational notebooks, such as Jupyter, are of particular interest as they provide rich…

Human-Computer Interaction · Computer Science 2023-01-27 Andrew M. McNutt , Chenglong Wang , Robert A. DeLine , Steven M. Drucker

Programmers frequently engage with machine learning tutorials in computational notebooks and have been adopting code generation technologies based on large language models (LLMs). However, they encounter difficulties in understanding and…

Human-Computer Interaction · Computer Science 2024-07-15 Ruijia Cheng , Titus Barik , Alan Leung , Fred Hohman , Jeffrey Nichols

Interactive notebooks are a precious tool for creating graphical user interfaces and teaching materials. Python and Jupyter are becoming increasingly popular in this context, with Jupyter widgets at the core of the interactive…

Physics Education · Physics 2024-09-02 Dou Du , Taylor J. Baird , Kristjan Eimre , Sara Bonella , Giovanni Pizzi

Duplicating one's own code makes it faster to write software. This expediency is particularly valuable for users of computational notebooks. Duplication allows notebook users to quickly test hypotheses and iterate over data. In this paper,…

Software Engineering · Computer Science 2020-05-29 Andreas Koenzen , Neil Ernst , Margaret-Anne Storey

With the goal of identifying common practices in data science projects, this paper proposes a framework for logging and understanding incremental code executions in Jupyter notebooks. This framework aims to allow reasoning about how…

Human-Computer Interaction · Computer Science 2024-05-29 Jinjin Zhao , Avidgor Gal , Sanjay Krishnan

One of the central tasks in software maintenance is being able to understand and develop code changes. Thus, given a natural language description of the desired new operation of a function, an agent (human or AI) might be asked to generate…

Software Engineering · Computer Science 2025-02-05 Kunal Pai , Premkumar Devanbu , Toufique Ahmed

Computational methods for predicting and designing biomolecular structures are increasingly powerful. While previous approaches relied on physics-based modeling, modern tools, such as AlphaFold2 in CASP14, leverage artificial intelligence…

Biomolecules · Quantitative Biology 2025-11-05 Michael Chungyoun , Gabe Au , Britnie Carpentier , Sreevarsha Puvada , Courtney Thomas , Jeffrey J. Gray

Large language models (LLMs) benefit greatly from prompt engineering, with in-context learning standing as a pivital technique. While former approaches have provided various ways to construct the demonstrations used for in-context learning,…

Artificial Intelligence · Computer Science 2024-06-18 Yiming Tang , Bin Dong

The rapid advancement of large language models (LLMs) has led to the widespread adoption of AI-powered coding assistants integrated into a development environment. On one hand, low-latency code completion offers completion suggestions but…

Software Engineering · Computer Science 2025-09-16 Ruofan Lu , Yintong Huo , Meng Zhang , Yichen Li , Michael R. Lyu

Modern computing students often rely on both natural-language prompting and manual code editing to solve programming tasks. Yet we still lack a clear understanding of how these two modes are combined in practice, and how their usage varies…

There is a gap between how people explore data and how Jupyter-like computational notebooks are designed. People explore data nonlinearly, using execution undos, branching, and/or complete reverts, whereas notebooks are designed for…

Human-Computer Interaction · Computer Science 2025-04-03 Hanxi Fang , Supawit Chockchowwat , Hari Sundaram , Yongjoo Park

Jupyter Notebook is an interactive development environment commonly used for rapid experimentation of machine learning (ML) solutions. Describing the ML activities performed along code cells improves the readability and understanding of…

Software Engineering · Computer Science 2024-03-13 Miguel Perez , Selin Aydin , Horst Lichter