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Roots provide basic functions to plants such as water/nutrient uptake and anchoring in soil. The growth and development of root systems contribute to colonizing the surrounding soil and optimizing the access to resources. It is usually…

Soft Condensed Matter · Physics 2019-04-24 M. Fakih , J. -Y. Delenne , F. Radjai , T. Fourcaud

Riparian vegetation along riverbanks and seagrass along coastlines interact with water currents, significantly altering their flow. To characterise the turbulent fluid motion along the streamwise--edge of a region covered by submerged…

Fluid Dynamics · Physics 2025-09-23 Giulio Foggi Rota , Elisa Tressoldi , Francesco Avallone , Marco Edoardo Rosti

We propose a model to study the spatiotemporal dynamics of biocrust and vegetation cover on sand dunes. The model consists of two coupled partial nonlinear differential equations and includes diffusion and advection terms for modeling the…

Pattern Formation and Solitons · Physics 2022-05-18 Hezi Yizhaq , Yosef Ashkenazy

The root is an important organ of a plant since it is responsible for water and nutrient uptake. Analyzing and modelling variabilities in the geometry and topology of roots can help in assessing the plant's health, understanding its growth…

Graphics · Computer Science 2021-01-26 Guan Wang , Hamid Laga , Jinyuan Jia , Stanley J. Miklavcic , Anuj Srivastava

Windblown sand creates multiscale bedforms on Earth, Mars, and other planetary bodies. According to conventional wisdom, decameter-scale dunes and decimeter-scale ripples emerge via distinct mechanisms on Earth: a hydrodynamic instability…

Ocean mesoscale eddies enhance meridional buoyancy transport, notably in the Antarctic Circumpolar Current where they contribute to setting the deep stratification of the neighboring ocean basins. The much-needed parameterization of this…

Fluid Dynamics · Physics 2023-08-02 Julie Meunier , Benjamin Miquel , Basile Gallet

Patches of vegetation consist of dense clusters of shrubs, grass, or trees, often found to be circular characteristic size, defined by the properties of the vegetation and terrain. Therefore, vegetation patches can be interpreted as…

Pattern Formation and Solitons · Physics 2017-11-29 Mustapha Tlidi , Ignacio Bordeu , Marcel G. Clerc , Daniel Escaff

In the subtropical gyres, phytoplankton rely on eddies for transporting nutrients from depth to the euphotic zone. But, what controls the rate of nutrient supply for new production? We show that vertical nutrient flux depends both on the…

Populations and Evolution · Quantitative Biology 2022-03-02 Mara Freilich , Glenn Flierl , Amala Mahadevan

We investigate certain aspects of the physical mechanisms of root growth in a granular medium and how these roots adapt to changes in water distribution induced by the presence of structural inhomogeneities in the form of solid intrusions.…

Coastal upwelling, driven by alongshore winds and characterized by cold sea surface temperatures and high upper-ocean nutrient content, is an important physical process sustaining some of the oceans' most productive ecosystems. To fully…

Atmospheric and Oceanic Physics · Physics 2023-12-11 Elle Weeks , Martin Losch , Eli Tziperman

Dynamic trees are mixtures of tree structured belief networks. They solve some of the problems of fixed tree networks at the cost of making exact inference intractable. For this reason approximate methods such as sampling or mean field…

Machine Learning · Computer Science 2013-01-18 Amos J. Storkey

A theoretical model for stratified epithelium is presented. The viscoelastic properties of the tissue is assumed to be dependent on the spatial distribution of proliferative and differentiated cells. Based on this assumption, a hydrodynamic…

Biological Physics · Physics 2016-06-08 Wei-Ting Yeh , Hsuan-Yi Chen

The role of turbulent large-scale streaks in forming subaqueous sediment ridges on an initially flat sediment bed is investigated with the aid of particle-resolved direct numerical simulations of open channel flow at bulk Reynolds numbers…

Fluid Dynamics · Physics 2021-11-24 Markus Scherer , Markus Uhlmann , Aman G. Kidanemariam , Michael Krayer

Active hydrothermal vents provide the surrounding submarine environment with substantial amounts of matter and energy, thus serving as important habitats for diverse megabenthic communities in the deep ocean and constituting a unique,…

The expansion of a population into new habitat is a transient process that leaves its footprints in the genetic composition of the expanding population. How the structure of the environment shapes the population front and the evolutionary…

Populations and Evolution · Quantitative Biology 2018-11-26 Daniel A. Beller , Kim M. J. Alards , Francesca Tesser , Ricardo A. Mosna , Federico Toschi , Wolfram Möbius

Banded patterns consisting of alternating bare soil and dense vegetation have been observed in water-limited ecosystems across the globe, often appearing along gently sloped terrain with the stripes aligned transverse to the elevation…

Pattern Formation and Solitons · Physics 2023-06-16 Punit Gandhi , Lucien Werner , Sarah Iams , Karna Gowda , Mary Silber

Understanding how submerged vegetation modifies the water surface is crucial for modeling momentum exchange between shallow waters and the atmosphere. In particular, quantifying its impact on the equivalent aerodynamic roughness of the…

Fluid Dynamics · Physics 2026-01-26 Giulio Foggi Rota , Alessandro Chiarini , Marco Edoardo Rosti

Seismic and geodynamic studies indicate that the boundary between the Earth's liquid outer core and solid mantle is not spherical, but is likely characterized by topography in the form of inverted mountains and valleys that have typical…

Geophysics · Physics 2025-06-10 Tobias G. Oliver , Eric G. Blackman , John A. Tarduno , Michael A. Calkins

Dryland vegetation can survive water stress by forming spatial patterns but is often subjected to herbivory as an additional stress that puts it at risk of desertification. Understanding the mutual relationships between vegetation…

Populations and Evolution · Quantitative Biology 2026-02-17 Joydeep Singha , Hannes Uecker , Ehud Meron

The hierarchical and recursive expressive capability of rooted trees is applicable to represent statistical models in various areas, such as data compression, image processing, and machine learning. On the other hand, such hierarchical…

Machine Learning · Computer Science 2022-01-25 Yuta Nakahara , Shota Saito , Akira Kamatsuka , Toshiyasu Matsushima
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