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Next-generation High Energy Physics (HEP) experiments will generate unprecedented data volumes, necessitating High Performance Computing (HPC) integration alongside traditional high-throughput computing. However, HPC adoption in HEP is…

Software Engineering · Computer Science 2025-08-26 Mohammad Atif , Kriti Chopra , Ozgur Kilic , Tianle Wang , Zhihua Dong , Charles Leggett , Meifeng Lin , Paolo Calafiura , Salman Habib

High-resolution volumetric imaging techniques, such as X-ray tomography and advanced microscopy, generate increasingly large datasets that challenge existing tools for efficient processing, segmentation, and interactive exploration. This…

Computer Vision and Pattern Recognition · Computer Science 2025-11-18 Camila Machado de Araujo , Egon P. B. S. Borges , Ricardo Marcelo Canteiro Grangeiro , Allan Pinto

For an increasing number of data intensive scientific applications, parallel I/O concepts are a major performance issue. Tackling this issue, we develop an input/output system designed for highly efficient, scalable and conveniently usable…

Distributed, Parallel, and Cluster Computing · Computer Science 2018-08-06 Erich Schikuta , Helmut Wanek , Heinz Stockinger , Kurt Stockinger , Thomas Fürle , Oliver Jorns , Christoph Löffelhardt , Peter Brezany , Minh Dang , Thomas Mück

Bringing a high-dimensional dataset into science-ready shape is a formidable challenge that often necessitates data compression. Compression has accordingly become a key consideration for contemporary cosmology, affecting public data…

Cosmology and Nongalactic Astrophysics · Physics 2020-08-25 Alan Heavens , Elena Sellentin , Andrew Jaffe

Many scientific data sets contain temporal dimensions. These are the data storing information at the same spatial location but different time stamps. Some of the biggest temporal datasets are produced by parallel computing applications such…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-03-13 Zheng Yuan , William Hendrix , Seung Woo Son , Christoph Federrath , Ankit Agrawal , Wei-keng Liao , Alok Choudhary

Hyperparameter optimization, also known as hyperparameter tuning, is a widely recognized technique for improving model performance. Regrettably, when training private ML models, many practitioners often overlook the privacy risks associated…

Machine Learning · Computer Science 2023-11-28 Hua Wang , Sheng Gao , Huanyu Zhang , Weijie J. Su , Milan Shen

Today's large-scale scientific applications running on high-performance computing (HPC) systems generate vast data volumes. Thus, data compression is becoming a critical technique to mitigate the storage burden and data-movement cost.…

Distributed, Parallel, and Cluster Computing · Computer Science 2023-05-04 Boyuan Zhang , Jiannan Tian , Sheng Di , Xiaodong Yu , Yunhe Feng , Xin Liang , Dingwen Tao , Franck Cappello

HEP data-processing software must support the disparate physics needs of many experiments. For both collider and neutrino environments, HEP experiments typically use data-processing frameworks to manage the computational complexities of…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-03-29 Christopher D. Jones , Kyle Knoepfel , Paolo Calafiura , Charles Leggett , Vakhtang Tsulaia

The freud Python package is a powerful library for analyzing simulation data. Written with modern simulation and data analysis workflows in mind, freud provides a Python interface to fast, parallelized C++ routines that run efficiently on…

Data frames in scripting languages are essential abstractions for processing structured data. However, existing data frame solutions are either not distributed (e.g., Pandas in Python) and therefore have limited scalability, or they are not…

Distributed, Parallel, and Cluster Computing · Computer Science 2017-04-11 Ehsan Totoni , Wajih Ul Hassan , Todd A. Anderson , Tatiana Shpeisman

The proliferation of low-precision units in modern high-performance architectures increasingly burdens domain scientists. Historically, the choice in HPC was easy: can we get away with 32 bit floating-point operations and lower bandwidth…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-09-23 Faveo Hoerold , Ivan R. Ivanov , Akash Dhruv , William S. Moses , Anshu Dubey , Mohamed Wahib , Jens Domke

Modern analysis of high energy physics (HEP) data needs advanced statistical tools to separate signal from background. A C++ package has been implemented to provide such tools for the HEP community. The package includes linear and quadratic…

Data Analysis, Statistics and Probability · Physics 2007-05-23 I. Narsky

New generations of power systems, containing high shares of renewable energy resources, require improved data-driven tools which can swiftly adapt to changes in system operation. Many of these tools, such as ones using machine learning,…

Systems and Control · Electrical Eng. & Systems 2024-03-12 Ignasi Ventura Nadal , Samuel Chevalier

High Performance Compute (HPC) clusters often produce intermediate files as part of code execution and message passing is not always possible to supply data to these cluster jobs. In these cases, I/O goes back to central distributed storage…

Distributed, Parallel, and Cluster Computing · Computer Science 2022-12-07 Gabryel Mason-Williams , Dave Bond , Mark Basham

Photon-HDF5 is an open-source and open file format for storing photon-counting data from single molecule microscopy experiments, introduced to simplify data exchange and increase the reproducibility of data analysis. Part of the Photon-HDF5…

Quantitative Methods · Quantitative Biology 2022-03-22 Donald Ferschweiler , Maya Segal , Shimon Weiss , Xavier Michalet

Representing scientific data sets efficiently on external storage usually involves converting them to a byte string representation using specialized reader/writer routines. The resulting storage files are frequently difficult to interpret…

Computational Engineering, Finance, and Science · Computer Science 2007-05-23 Christoph Best

The reliance on radiation-hardened hardware, essential for domains requiring high-dependability such as space, nuclear energy and medical applications, severely restricts the choice of components available for modern AI-intensive tasks,…

Distributed, Parallel, and Cluster Computing · Computer Science 2025-04-08 Carlos Rafael Tordoya Taquichiri , Hans Dermot Doran , Pablo Ghiglino , Mandar Harshe

Distinct HEP workflows have distinct I/O needs; while ROOT I/O excels at serializing complex C++ objects common to reconstruction, analysis workflows typically have simpler objects and can sustain higher event rates. To meet these…

Distributed, Parallel, and Cluster Computing · Computer Science 2020-08-26 Brian Bockelman , Zhe Zhang , Oksana Shadura

We present a technique for automatically transforming kernel-based computations in disparate, nested loops into a fused, vectorized form that can reduce intermediate storage needs and lead to improved performance on contemporary hardware.…

Performance · Computer Science 2017-10-25 Jason Sewall , Simon J. Pennycook

We present POLO --- a C++ library for large-scale parallel optimization research that emphasizes ease-of-use, flexibility and efficiency in algorithm design. It uses multiple inheritance and template programming to decompose algorithms into…

Optimization and Control · Mathematics 2018-10-09 Arda Aytekin , Martin Biel , Mikael Johansson