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Two fundamental challenges face generative models in engineering applications: the acquisition of high-performing, diverse datasets, and the adherence to precise constraints in generated designs. We propose a novel approach combining…

Neural and Evolutionary Computing · Computer Science 2024-05-17 Adam Gaier , James Stoddart , Lorenzo Villaggi , Shyam Sudhakaran

The way to infer well-supported phylogenetic trees that precisely reflect the evolutionary process is a challenging task that completely depends on the way the related core genes have been found. In previous computational biology studies,…

Individual-level data (microdata) that characterizes a population, is essential for studying many real-world problems. However, acquiring such data is not straightforward due to cost and privacy constraints, and access is often limited to…

Machine Learning · Computer Science 2022-12-13 Angeela Acharya , Siddhartha Sikdar , Sanmay Das , Huzefa Rangwala

Phylogenetic trees elucidate evolutionary relationships among species, but phylogenetic inference remains challenging due to the complexity of combining continuous (branch lengths) and discrete parameters (tree topology). Traditional Markov…

Populations and Evolution · Quantitative Biology 2024-12-30 ChenRui Duan , Zelin Zang , Siyuan Li , Yongjie Xu , Stan Z. Li

Clustering is a difficult and widely-studied data mining task, with many varieties of clustering algorithms proposed in the literature. Nearly all algorithms use a similarity measure such as a distance metric (e.g. Euclidean distance) to…

Neural and Evolutionary Computing · Computer Science 2019-10-24 Andrew Lensen , Bing Xue , Mengjie Zhang

A phylogenetic tree shows the evolutionary relationships among species. Internal nodes of the tree represent speciation events and leaf nodes correspond to species. A goal of phylogenetics is to combine such trees into larger trees, called…

Artificial Intelligence · Computer Science 2014-01-16 Neil C. A. Moore , Patrick Prosser

This paper focuses on Code Generation task that aims at generating relevant code fragments according to given natural language descriptions. In the process of software development, developers often encounter two scenarios. One is requested…

Software Engineering · Computer Science 2024-04-19 Zezhou Yang , Sirong Chen , Cuiyun Gao , Zhenhao Li , Ge Li , Michael Lyu

Text-to-CAD code generation is a long-horizon task that translates textual instructions into long sequences of interdependent operations. Existing methods typically decode text directly into executable code (e.g., bpy) without explicitly…

Artificial Intelligence · Computer Science 2026-04-14 Shengjie Gong , Wenjie Peng , Hongyuan Chen , Gangyu Zhang , Yunqing Hu , Huiyuan Zhang , Shuangping Huang , Tianshui Chen

We present a new program synthesis approach that combines an encoder-decoder based synthesis architecture with a differentiable program fixer. Our approach is inspired from the fact that human developers seldom get their program correct on…

Machine Learning · Statistics 2020-06-22 Matej Balog , Rishabh Singh , Petros Maniatis , Charles Sutton

This paper investigates source code similarity detection using a transformer model augmented with an execution-derived signal. We extend GraphCodeBERT with an explicit, low-dimensional behavioral feature that captures observable agreement…

Software Engineering · Computer Science 2026-02-11 Jorge Martinez-Gil

Data complexity analysis quantifies the hardness of constructing a predictive model on a given dataset. However, the effectiveness of existing data complexity measures can be challenged by the existence of irrelevant features and feature…

Computational Engineering, Finance, and Science · Computer Science 2023-08-15 Zhendong Sha , Li Zhu , Zijun Jiang , Yuanzhu Chen , Ting Hu

Feature selection aims to identify the most pattern-discriminative feature subset. In prior literature, filter (e.g., backward elimination) and embedded (e.g., Lasso) methods have hyperparameters (e.g., top-K, score thresholding) and tie to…

Machine Learning · Computer Science 2024-03-07 Wangyang Ying , Dongjie Wang , Haifeng Chen , Yanjie Fu

Large Language Models (LLMs) have demonstrated remarkable capabilities in various tasks, yet code generation remains a major challenge. Current approaches for obtaining high-quality code data primarily focus on (i) collecting large-scale…

Computation and Language · Computer Science 2025-02-18 Yichuan Ma , Yunfan Shao , Peiji Li , Demin Song , Qipeng Guo , Linyang Li , Xipeng Qiu , Kai Chen

Code completion is a prominent application of Large Language Models (LLMs) in software engineering. Due to the near real-time response requirements of this task, base models with small to medium-sized parameters are typically employed,…

Software Engineering · Computer Science 2025-09-18 Dongjun Yu , Xiao Yan , Zhenrui Li , Jipeng Xiao , Haochuan He , Yongda Yu , Hao Zhang , Guoping Rong , Xiaobo Huang

We develop a framework for applying treewidth-based dynamic programming on graphs with "hybrid structure", i.e., with parts that may not have small treewidth but instead possess other structural properties. Informally, this is achieved by…

Data Structures and Algorithms · Computer Science 2019-08-28 Eduard Eiben , Robert Ganian , Thekla Hamm , O-joung Kwon

Automatic tree density estimation and counting using single aerial and satellite images is a challenging task in photogrammetry and remote sensing, yet has an important role in forest management. In this paper, we propose the first…

Computer Vision and Pattern Recognition · Computer Science 2023-08-09 Hamed Amini Amirkolaee , Miaojing Shi , Mark Mulligan

The motivation of the current study was to design an algorithm that can speed up the processing of a query. The important feature is generating code dynamically for a specific query. We present the technique of code generation that is…

Databases · Computer Science 2017-12-12 Xin Zhang

Long document classification presents challenges in capturing both local and global dependencies due to their extensive content and complex structure. Existing methods often struggle with token limits and fail to adequately model…

Computation and Language · Computer Science 2024-10-07 Sudipta Singha Roy , Xindi Wang , Robert E. Mercer , Frank Rudzicz

Keyphrase provides highly-condensed information that can be effectively used for understanding, organizing and retrieving text content. Though previous studies have provided many workable solutions for automated keyphrase extraction, they…

Computation and Language · Computer Science 2021-06-02 Rui Meng , Sanqiang Zhao , Shuguang Han , Daqing He , Peter Brusilovsky , Yu Chi

Traditional defect prediction approaches often use metrics that measure the complexity of the design or implementing code of a software system, such as the number of lines of code in a source file. In this paper, we explore a different…

Software Engineering · Computer Science 2024-09-30 Hung Viet Pham , Tung Thanh Nguyen
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