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Spatial transcriptomics (ST) technologies can be used to align transcriptomes with histopathological morphology, presenting exciting new opportunities for biomolecular discovery. Using ST data, we construct a novel framework, GeneFlow, to…

Quantitative Methods · Quantitative Biology 2025-11-04 Mengbo Wang , Shourya Verma , Aditya Malusare , Luopin Wang , Yiyang Lu , Vaneet Aggarwal , Mario Sola , Ananth Grama , Nadia Atallah Lanman

The precise control of liquid-liquid phase separation (LLPS) is the key to developing cutting-edge technologies that benefit diverse disciplines. Fluid flow was found to be capable of controlling the structure and effective temperature of…

Fluid Dynamics · Physics 2024-07-04 Yulin Li , Tong Zhou , Yanyu Li , Qi Zhang , Zhihong You

The flow near a moving contact line depends on the dynamic contact angle, viscosity ratio, and capillary number. We report experiments involving immersing a plate into a liquid bath, concurrently measuring the interface shape, interfacial…

Fluid Dynamics · Physics 2024-12-04 Charul Gupta , Anjishnu Choudhury , Lakshmana D Chandrala , Harish N Dixit

Flow in thin films is highly dependent on the boundary conditions. Here, we study the capillary levelling of thin bilayer films composed of two immiscible liquids. Specifically, a stepped polymer layer is placed atop another, flat polymer…

Soft Condensed Matter · Physics 2021-01-27 Vincent Bertin , Carmen Lee , Thomas Salez , Elie Raphael , Kari Dalnoki-Veress

Interactions between an evolving solid and inviscid flow can result in substantial computational complexity, particularly in circumstances involving varied boundary conditions between the solid and fluid phases. Examples of such…

Fluid Dynamics · Physics 2022-09-30 Emma M. Schmidt , J. Matt Quinlan , Brandon Runnels

This work aims at generating a model of the ocean surface and its dynamics from one or more video cameras. The idea is to model wave patterns from video as a first step towards a larger system of photogrammetric monitoring of marine…

Computer Vision and Pattern Recognition · Computer Science 2013-10-01 Mauro de Amorim , Ricardo Fabbri , Lucia Maria dos Santos Pinto , Francisco Duarte Moura Neto

A pore-scale model is introduced for two-phase flow in dense packings of polydisperse spheres. The model is developed as a component of a more general hydromechanical coupling framework based on the discrete element method, which will be…

Soft Condensed Matter · Physics 2016-01-06 Chao Yuan , Bruno Chareyre , Félix Darve

Free-surface synthetic Schlieren (FS-SS) is a high-resolution, refraction-based optical technique for measuring the instantaneous elevation of a liquid interface. Under the assumptions of small amplitude, small slope, and small paraxial…

Fluid Dynamics · Physics 2026-05-13 Shimin Zhang , Frédéric Moisy , Wietze Herreman , Zhiliang Lin

Direct numerical simulations (DNS) are performed for two wall-bounded flow configurations: laminar Couette flow at $Re=740$ and turbulent channel flow at $Re_{\tau}=180$, where $\tau$ is the shear stress at the wall. The top wall is smooth…

Fluid Dynamics · Physics 2019-07-22 Karim Alamé , Krishnan Mahesh

In this paper, we investigated the thermocapillary migration of a self-rewetting droplet on an inclined surface using a phase field based lattice Boltzmann method. Unlike the normal fluid whose surface tension decreases linearly with…

Fluid Dynamics · Physics 2024-07-18 He Yan , Lei Wang , Jiangxu Huang , Yuan Yu

Recent experimental studies on the instability appearance of capillary jets have revealed the capabilities of linear spatiotemporal instability analysis to predict the parametrical map where steady jetting or dripping takes place. In this…

Fluid Dynamics · Physics 2009-11-13 Miguel A. Herrada , Alfonso M. Ganan-Calvo , Pierre Guillot

A millimetre-size superhydrophobic sphere impacting on the free surface of a quiescent bath can be propelled back into the air by capillary effects and dynamic fluid forces, whilst transferring part of its energy to the fluid. We report the…

We present experiments to study the relaxation of a nano-scale cylindrical perturbation at one of the two interfaces of a thin viscous free-standing polymeric film. Driven by capillarity, the film flows and evolves towards equilibrium by…

Soft Condensed Matter · Physics 2020-05-13 Vincent Bertin , John Niven , Howard A. Stone , Thomas Salez , Elie Raphael , Kari Dalnoki-Veress

Direct pore scale simulations of two-fluid flow on digital rock images provide a promising tool to understand the role of surface wetting phenomena on flow and transport in geologic reservoirs. We present computational protocols that mimic…

Geophysics · Physics 2020-07-27 James E. McClure , Zhe Li , Mark Berrill , Thomas Ramstad

We present a computational framework to address the flow of two immiscible viscous liquids which co-flow into a shallow rectangular container at one side, and flow out into a holding container at the opposite side. Assumptions based on the…

Fluid Dynamics · Physics 2013-09-02 Shahriar Afkhami , Yuriko Renardy

Spatial transcriptomics (ST) has emerged as a powerful technology for bridging histology imaging with gene expression profiling. However, its application has been limited by low throughput and the need for specialized experimental…

Computer Vision and Pattern Recognition · Computer Science 2025-06-09 Tinglin Huang , Tianyu Liu , Mehrtash Babadi , Wengong Jin , Rex Ying

Diffusing-Wave Spectroscopy (DWS) allows for the direct measurement of the squared strain-rate tensor. When combined with commonly available high-speed cameras, we show that DWS gives direct access to the spatio-temporal variations of the…

Fluid Dynamics · Physics 2023-09-01 Enzo Francisco , Vincent Bouillaut , Tong Wu , Sébastien Aumaître

In this study optical flow method was used for soil small deformation measurement in laboratory tests. The main objective was to observe how the deformation distributes along the whole height of cylindrical soil specimen subjected to…

Computational Engineering, Finance, and Science · Computer Science 2021-02-09 Piotr E. Srokosz , Marcin Bujko , Marta Bocheńska , Rafał Ossowski

Steady-state upscaling of relative permeability is studied for a range of reservoir models. Both rate-dependent upscaling and upscaling in the capillary and viscous limits are considered. In particular, we study fluvial depositional…

Fluid Dynamics · Physics 2017-08-01 Lars Hov Odsæter , Carl Fredrik Berg , Alf Birger Rustad

A simple model of two-phase flow in porous media is presented. A connection is made to statistical mechanics by applying capillary power as a constraint. Stochastic sampling is then used to test the validity of this approach. Good agreement…

Soft Condensed Matter · Physics 2012-05-09 Morten Grøva
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