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The Hofstadter model successfully describes the behavior of non-interacting quantum particles hopping on a lattice coupled to a gauge field, and hence is ubiquitous in many fields of research, including condensed matter, optical, and atomic…

Mesoscale and Nanoscale Physics · Physics 2024-03-28 Bartholomew Andrews

Hybrid quantum-classical machine learning represents a frontier in computational research, combining the potential advantages of quantum computing with established classical optimization techniques. PennyLane provides a Python framework…

Software Engineering · Computer Science 2025-11-20 Sidney Shapiro

We present a standalone implementation of a data-deconvolution method based on singular value decomposition. The tool is written in python and packaged in the open-source yonder package. yonder receives as input two matrices, one for the…

Instrumentation and Methods for Astrophysics · Physics 2022-05-30 Peng Chen , Rafael S. de Souza

The $\texttt{torch-choice}$ is an open-source library for flexible, fast choice modeling with Python and PyTorch. $\texttt{torch-choice}$ provides a $\texttt{ChoiceDataset}$ data structure to manage databases flexibly and…

Machine Learning · Computer Science 2025-06-05 Tianyu Du , Ayush Kanodia , Susan Athey

Symbolic Mathematical tasks such as integration often require multiple well-defined steps and understanding of sub-tasks to reach a solution. To understand Transformers' abilities in such tasks in a fine-grained manner, we deviate from…

Artificial Intelligence · Computer Science 2021-04-30 Vishesh Agarwal , Somak Aditya , Navin Goyal

In deterministic optimization, it is typically assumed that all problem parameters are fixed and known. In practice, however, some parameters may be a priori unknown but can be estimated from contextual information. A typical…

Optimization and Control · Mathematics 2026-04-21 Bo Tang , Elias B. Khalil

In this paper, we introduce si4onnx, a package for performing selective inference on deep learning models. Techniques such as CAM in XAI and reconstruction-based anomaly detection using VAE can be interpreted as methods for identifying…

Machine Learning · Computer Science 2025-01-30 Teruyuki Katsuoka , Tomohiro Shiraishi , Daiki Miwa , Shuichi Nishino , Ichiro Takeuchi

Neural operators have emerged as fast surrogate solvers for parametric partial differential equations (PDEs). However, purely data-driven models often require extensive training data and can generalize poorly, especially in small-data…

Machine Learning · Computer Science 2026-02-16 Heechang Kim , Qianying Cao , Hyomin Shin , Seungchul Lee , George Em Karniadakis , Minseok Choi

We present a python-based program for phenomenological investigations in particle physics using machine learning algorithms, called \verb"MLAnalysis". The program is able to convert LHE and LHCO files generated by \verb"MadGraph5_aMC@NLO"…

High Energy Physics - Phenomenology · Physics 2023-10-18 Yu-Chen Guo , Fan Feng , An Di , Shi-Qi Lu , Ji-Chong Yang

We propose an algebraic model of computation which formally relates symbolic listings, complexity of Boolean functions, and low depth arithmetic circuit complexity. In this model algorithms are arithmetic formula expressing symbolic…

Discrete Mathematics · Computer Science 2024-03-26 Hamilton Sawczuk , Edinah Gnang

We present the Python Tree Tensor Network package (pyTTN) for the evaluation of dynamical properties of closed and open quantum systems that makes use of Tree Tensor Network (TTN), or equivalently the multi-layer multiconfiguration…

Quantum Physics · Physics 2025-03-20 Lachlan P Lindoy , Daniel Rodrigo-Albert , Yannic Rath , Ivan Rungger

Explaining observed phenomena through symbolic, interpretable formulas is a fundamental goal of science. Recently, large language models (LLMs) have emerged as promising tools for symbolic equation discovery, owing to their broad domain…

Artificial Intelligence · Computer Science 2026-02-26 Jianke Yang , Ohm Venkatachalam , Mohammad Kianezhad , Sharvaree Vadgama , Rose Yu

We introduce cellanneal, a python-based software for deconvolving bulk RNA sequencing data. cellanneal relies on the optimization of Spearman's rank correlation coefficient between experimental and computational mixture gene expression…

Quantitative Methods · Quantitative Biology 2021-10-18 Lisa Buchauer , Shalev Itzkovitz

The Partially Ordered Workflow Language (POWL) has recently emerged as a process modeling notation, offering strong quality guarantees and high expressiveness. However, its adoption is hindered by the prevalence of standard notations like…

Logic in Computer Science · Computer Science 2025-09-22 Humam Kourani , Gyunam Park , Wil van der Aalst

We formalise the pi-calculus using the nominal datatype package, based on ideas from the nominal logic by Pitts et al., and demonstrate an implementation in Isabelle/HOL. The purpose is to derive powerful induction rules for the semantics…

Logic in Computer Science · Computer Science 2015-07-01 Jesper Bengtson , Joachim Parrow

It is shown how the Python library Sympy can be used to compute symbolically the coefficients of the power series solution of the Lane-Emden equation (LEE). Sympy is an open source Python library for symbolic mathematics. The power series…

Mathematical Software · Computer Science 2015-01-27 Klaus Rohe

Modelling complex multiphysics systems governed by nonlinear and strongly coupled partial differential equations (PDEs) is a cornerstone in computational science and engineering. However, it remains a formidable challenge for traditional…

Machine Learning · Computer Science 2025-02-28 Biao Yuan , He Wang , Yanjie Song , Ana Heitor , Xiaohui Chen

Machine-learning methods are gradually being adopted in a wide variety of social, economic, and scientific contexts, yet they are notorious for struggling with exact mathematics. A typical example is computer algebra, which includes tasks…

Machine Learning · Computer Science 2024-11-06 Lennart Dabelow , Masahito Ueda

We present a major update to QuSpin, SciPostPhys.2.1.003 -- an open-source Python package for exact diagonalization and quantum dynamics of arbitrary boson, fermion and spin many-body systems, supporting the use of various (user-defined)…

Computational Physics · Physics 2019-08-14 Phillip Weinberg , Marin Bukov

Because the choice and tuning of the optimizer affects the speed, and ultimately the performance of deep learning, there is significant past and recent research in this area. Yet, perhaps surprisingly, there is no generally agreed-upon…

Machine Learning · Computer Science 2019-03-14 Frank Schneider , Lukas Balles , Philipp Hennig