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We present pomegranate, an open source machine learning package for probabilistic modeling in Python. Probabilistic modeling encompasses a wide range of methods that explicitly describe uncertainty using probability distributions. Three…

Artificial Intelligence · Computer Science 2018-03-01 Jacob Schreiber

PennyLane is a Python 3 software framework for differentiable programming of quantum computers. The library provides a unified architecture for near-term quantum computing devices, supporting both qubit and continuous-variable paradigms.…

Quantum computation is inherently hybrid, and fast classical manipulation of qubit operators is necessary to ensure scalability in quantum software. We introduce PauliEngine, a high-performance C++ framework that provides efficient…

Quantum Physics · Physics 2026-05-13 Leon Müller , Adelina Bärligea , Alexander Knapp , Jakob S. Kottmann

We introduce c-lasso, a Python package that enables sparse and robust linear regression and classification with linear equality constraints. The underlying statistical forward model is assumed to be of the following form: \[ y = X \beta +…

Computation · Statistics 2020-11-03 Léo Simpson , Patrick L. Combettes , Christian L. Müller

To improve the performance and explainability of LLM-based natural language reasoning, structured reasoning can be applied to generate explicitly structured proofs. Among different methods for structured reasoning, we specifically focus on…

Computation and Language · Computer Science 2025-02-06 Jinu Lee , Wonseok Hwang

The Weyl closure is a basic operation in algebraic analysis: it converts a system of differential operators with rational coefficients into an equivalent system with polynomial coefficients. In addition to encoding finer information on the…

Symbolic Computation · Computer Science 2026-05-06 Hadrien Brochet

This paper introduces a new kind of propositional encoding for reasoning about partial orders. The symbols in an unspecified partial order are viewed as variables which take integer values and are interpreted as indices in the order. For a…

Programming Languages · Computer Science 2010-09-03 Michael Codish , Vitaly Lagoon , Peter J. Stuckey

PySR is an open-source library for practical symbolic regression, a type of machine learning which aims to discover human-interpretable symbolic models. PySR was developed to democratize and popularize symbolic regression for the sciences,…

Instrumentation and Methods for Astrophysics · Physics 2023-05-08 Miles Cranmer

This paper presents a generalised symbolic algorithm for solving systems of linear algebraic equations with multi-diagonal coefficient matrices. The algorithm is given in a pseudocode. A theorem which gives the condition for correctness of…

Symbolic Computation · Computer Science 2026-05-22 Milena Veneva

pyMOR is a free software library for model order reduction that includes both reduced basis and system-theoretic methods. All methods are implemented in terms of abstract vector and operator interfaces, which allows direct integration of…

Mathematical Software · Computer Science 2022-04-01 Petar Mlinarić , Stephan Rave , Jens Saak

Many significant quantum physical systems are characterized by Hamiltonians expressible as a linear combination of time-independent generators of a closed Lie algebra, $\hat{H}(t)=\sum_{l=1}^{L}\eta_{l}(t)\hat{g}_{l}$. The Wei-Norman method…

The aim of this paper is to give two new algorithms, which are elimination free, to find polynomial and rational solutions for a given holonomic system associated to a set of linear differential operators in the Weyl algebra D = k<x_1, ...,…

Algebraic Geometry · Mathematics 2007-05-23 T. Oaku , N. Takayama , H. Tsai

The holonomic gradient method gives an algorithm to efficiently and accurately evaluate normalizing constants and their derivatives. We apply the holonomic gradient method in the case of the conditional Poisson or multinomial distribution…

Classical Analysis and ODEs · Mathematics 2020-12-30 Yoshihito Tachibana , Yoshiaki Goto , Tamio Koyama , Nobuki Takayama

The dynamic mode decomposition (DMD) is a simple and powerful data-driven modeling technique that is capable of revealing coherent spatiotemporal patterns from data. The method's linear algebra-based formulation additionally allows for a…

We present the open-source image processing software package PySAP (Python Sparse data Analysis Package) developed for the COmpressed Sensing for Magnetic resonance Imaging and Cosmology (COSMIC) project. This package provides a set of…

Instrumentation and Methods for Astrophysics · Physics 2020-07-03 S. Farrens , A. Grigis , L. El Gueddari , Z. Ramzi , Chaithya G. R. , S. Starck , B. Sarthou , H. Cherkaoui , P. Ciuciu , J. -L. Starck

Logical models offer a simple but powerful means to understand the complex dynamics of biochemical regulation, without the need to estimate kinetic parameters. However, even simple automata components can lead to collective dynamics that…

Other Computer Science · Computer Science 2018-08-30 Rion Brattig Correia , Alexander J. Gates , Xuan Wang , Luis M. Rocha

Probabilistic neurosymbolic learning seeks to integrate neural networks with symbolic programming. Many state-of-the-art systems rely on a reduction to the Probabilistic Weighted Model Counting Problem (PWMC), which requires computing a…

Artificial Intelligence · Computer Science 2025-01-31 Thomas Jean-Michel Valentin , Luisa Sophie Werner , Pierre Genevès , Nabil Layaïda

We present BackboneLearn: an open-source software package and framework for scaling mixed-integer optimization (MIO) problems with indicator variables to high-dimensional problems. This optimization paradigm can naturally be used to…

Machine Learning · Computer Science 2023-11-27 Vassilis Digalakis , Christos Ziakas

A common technique in the study of complex quantum-mechanical systems is to reduce the number of degrees of freedom in the Hamiltonian by using quasi-degenerate perturbation theory. While the Schrieffer--Wolff transformation achieves this…

Quantum Physics · Physics 2025-02-19 Isidora Araya Day , Sebastian Miles , Hugo K. Kerstens , Daniel Varjas , Anton R. Akhmerov

We present a MATLAB package called the Pha-sorArray Toolbox that has been developed to make harmonic analysis and control methods both practical and user-friendly. The toolbox adopts an object-oriented architecture that enables intuitive…

Systems and Control · Electrical Eng. & Systems 2025-10-27 Maxime Grosso , Pierre Riedinger , Jamal Daafouz