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Many machine/deep learning artificial neural networks are trained to simply be interpolation functions that map input variables to output values interpolated from the training data in a linear/nonlinear fashion. Even when the input/output…

Computational Physics · Physics 2020-03-18 Zhenglin Geng , Dan Johnson , Ronald Fedkiw

Supervised machine learning algorithms, such as graph neural networks (GNN), have successfully predicted material properties. However, the superior performance of GNN usually relies on end-to-end learning on large material datasets, which…

Materials Science · Physics 2025-05-22 Jian-Gang Kong , Ke-Lin Zhao , Jian Li , Qing-Xu Li , Yu Liu , Rui Zhang , Jia-Ji Zhu , Kai Chang

A novel machine learning approach is used to provide further insight into atomic nuclei and to detect orderly patterns amidst a vast data of large-scale calculations. The method utilizes a neural network that is trained on ab initio results…

Nuclear Theory · Physics 2022-03-14 O. M. Molchanov , K. D. Launey , A. Mercenne , G. H. Sargsyan , T. Dytrych , J. P. Draayer

Predicting the structure of multi-protein complexes is a grand challenge in biochemistry, with major implications for basic science and drug discovery. Computational structure prediction methods generally leverage pre-defined structural…

Biomolecules · Quantitative Biology 2021-01-26 Stephan Eismann , Raphael J. L. Townshend , Nathaniel Thomas , Milind Jagota , Bowen Jing , Ron O. Dror

Despite their importance in a wide variety of applications, the estimation of ionization cross sections for large molecules continues to present challenges for both experiment and theory. Machine learning algorithms have been shown to be an…

Atomic Physics · Physics 2024-11-25 A. L. Harris , J. Nepomuceno

We employ a feed-forward artificial neural network to extrapolate at large model spaces the results of {\it ab-initio} hypernuclear No-Core Shell Model calculations for the $\Lambda$ separation energy $B_\Lambda$ of the lightest…

Nuclear Theory · Physics 2023-03-22 Isaac Vidana

We introduce a global nuclear mass formula which is based on the macroscopic-microscopic method, the Skyrme energy-density functional and the isospin symmetry in nuclear physics. The rms deviation with respect to 2149 known nuclear masses…

Nuclear Theory · Physics 2013-03-28 Ning Wang , Min Liu

Automated analyses of the outcome of a simulation have been an important part of atomistic modeling since the early days, addressing the need of linking the behavior of individual atoms and the collective properties that are usually the…

Chemical Physics · Physics 2019-05-22 Michele Ceriotti

We explore unique considerations involved in fitting ML models to data with very high precision, as is often required for science applications. We empirically compare various function approximation methods and study how they scale with…

Machine Learning · Computer Science 2023-02-01 Eric J. Michaud , Ziming Liu , Max Tegmark

Supervised learning on molecules has incredible potential to be useful in chemistry, drug discovery, and materials science. Luckily, several promising and closely related neural network models invariant to molecular symmetries have already…

Machine Learning · Computer Science 2017-06-14 Justin Gilmer , Samuel S. Schoenholz , Patrick F. Riley , Oriol Vinyals , George E. Dahl

Deep neural networks (DNNs) are powerful black-box predictors that have achieved impressive performance on a wide variety of tasks. However, their accuracy comes at the cost of intelligibility: it is usually unclear how they make their…

Machine Learning · Computer Science 2021-10-26 Rishabh Agarwal , Levi Melnick , Nicholas Frosst , Xuezhou Zhang , Ben Lengerich , Rich Caruana , Geoffrey Hinton

An adaptive modeling method (AMM) that couples a deep neural network potential and a classical force field is introduced to address the accuracy-efficiency dilemma faced by the molecular simulation community. The AMM simulated system is…

Chemical Physics · Physics 2018-11-14 Linfeng Zhang , Han Wang , Weinan E

This paper describes the development of the Four Model Tree Ensemble (FMTE). The FMTE is a composite of machine learning models trained on experimental binding energies from the Atomic Mass Evaluation (AME) 2012. The FMTE predicts binding…

Nuclear Theory · Physics 2026-02-19 I. Bentley , J. Tedder , M. Gebran , A. Paul

Large-scale atomistic computer simulations of materials heavily rely on interatomic potentials predicting the potential energy and Newtonian forces on atoms. Traditional interatomic potentials are based on physical intuition but contain few…

Materials Science · Physics 2019-06-11 G. P. Purja Pun , R. Batra , R. Ramprasad , Y. Mishin

The development of machine-learning models for atomic-scale simulations has benefited tremendously from the large databases of materials and molecular properties computed in the past two decades using electronic-structure calculations. More…

Motivated by the remarkable success of Foundation Models (FMs) in language modeling, there has been growing interest in developing FMs for time series prediction, given the transformative power such models hold for science and engineering.…

Machine Learning · Computer Science 2025-11-18 Ramzi Dakhmouche , Hossein Gorji

Modelling the complex physics of the Interstellar Medium (ISM) in the context of large-scale numerical simulations is a challenging task. A number of methods have been proposed to embed a description of the ISM into different codes. We…

Instrumentation and Methods for Astrophysics · Physics 2011-03-03 T. Grassi , E. Merlin , L. Piovan , U. Buonomo , C. Chiosi

We present a neural network (NN) potential based on a new set of atomic fingerprints built upon two- and three-body contributions that probe distances and local orientational order respectively. Compared to existing NN potentials, the…

Soft Condensed Matter · Physics 2023-03-22 Francesco Guidarelli Mattioli , Francesco Sciortino , John Russo

Deep neural operators can learn nonlinear mappings between infinite-dimensional function spaces via deep neural networks. As promising surrogate solvers of partial differential equations (PDEs) for real-time prediction, deep neural…

Machine Learning · Computer Science 2023-05-17 Min Zhu , Handi Zhang , Anran Jiao , George Em Karniadakis , Lu Lu

We train a model atom to recognize hand-written digits between 0 and 9, employing intense light--matter interaction as a computational resource. For training, individual images of hand-written digits in the range 0-9 are converted into…

Atomic Physics · Physics 2024-03-19 Thomas Pfeifer , Matthias Wollenhaupt , Manfred Lein
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