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Chemical gradients can be used by a particle to determine its position. This \textit{positional information} is of crucial importance, for example in developmental biology in the formation of patterns in an embryo. The central goal of this…

Statistical Mechanics · Physics 2025-02-21 Prashant Singh , Karel Proesmans

Lateral predictive coding is a recurrent neural network which creates energy-efficient internal representations by exploiting statistical regularity in sensory inputs. Here we investigate the trade-off between information robustness and…

Neurons and Cognition · Quantitative Biology 2024-06-17 Zhen-Ye Huang , Ruyi Zhou , Miao Huang , Hai-Jun Zhou

In order to transmit biochemical signals, biological regulatory systems dissipate energy with concomitant entropy production. Additionally, signaling often takes place in challenging environmental conditions. In a simple model regulatory…

Molecular Networks · Quantitative Biology 2015-09-30 Francesca Mancini , Matteo Marsili , Aleksandra M. Walczak

Reducing work fluctuation and dissipation in heat engines or, more generally, information heat engines that perform feedback control is vital to maximize their efficiency. The same problem arises when we attempt to maximize the efficiency…

Statistical Mechanics · Physics 2016-01-06 Ken Funo , Masahito Ueda

Biological organisms are open, adaptve systems that can respond to changes in environment in specific ways. Adaptation and response can be posed as an optimization problem, with a tradeoff between the benefit obtained from a response and…

Statistical Mechanics · Physics 2018-10-17 Suman G. Das , Madan Rao , Garud Iyengar

In order to respond to environmental signals, cells often use small molecular circuits to transmit information about their surroundings. Recently, motivated by concrete examples in signaling and gene regulation, a body of work has focused…

Molecular Networks · Quantitative Biology 2020-01-08 P. Szymańska-Rożek , D. Villamaina , J. Miȩkisz , A. M. Walczak

The conditional diffusion model has been demonstrated as an efficient tool for learning robot policies, owing to its advancement to accurately model the conditional distribution of policies. The intricate nature of real-world scenarios,…

Robotics · Computer Science 2024-07-03 Wenhao Yu , Jie Peng , Huanyu Yang , Junrui Zhang , Yifan Duan , Jianmin Ji , Yanyong Zhang

Realistic examples of reaction-diffusion phenomena governing spatial and spatiotemporal pattern formation are rarely isolated systems, either chemically or thermodynamically. However, even formulations of `open' reaction-diffusion systems…

Pattern Formation and Solitons · Physics 2021-05-14 Andrew L. Krause , Václav Klika , Philip K. Maini , Denis Headon , Eamonn A. Gaffney

Information processing typically occurs via the composition of modular units, such as universal logic gates. The benefit of modular information processing, in contrast to globally integrated information processing, is that complex global…

Statistical Mechanics · Physics 2018-08-08 Alexander B. Boyd , Dibyendu Mandal , James P. Crutchfield

A perfectly rational decision-maker chooses the best action with the highest utility gain from a set of possible actions. The optimality principles that describe such decision processes do not take into account the computational costs of…

Artificial Intelligence · Computer Science 2013-12-25 Jordi Grau-Moya , Daniel A. Braun

We propose predictive information, that is information between a long past of duration T and the entire infinitely long future of a time series, as a universal order parameter to study phase transitions in physical systems. It can be used,…

Statistical Mechanics · Physics 2014-02-04 Martin Tchernookov , Ilya Nemenman

Mutual information between particle positions before and after mixing provides a universal assumption-free measure of mixing efficiency at low Reynolds number which accounts for the kinematic reversibility of the Stokes equation. For a…

Statistical Mechanics · Physics 2025-06-19 Luca Cocconi , Yihong Shi , Andrej Vilfan

Information processing abilities of active matter are studied in the reservoir computing (RC) paradigm to infer the future state of a chaotic signal. We uncover an exceptional regime of agent dynamics that has been overlooked previously. It…

Adaptation and Self-Organizing Systems · Physics 2026-01-26 Mario U. Gaimann , Miriam Klopotek

A path information is defined in connection with different possible paths of irregular dynamic systems moving in its phase space between two points. On the basis of the assumption that the paths are physically differentiated by their…

Statistical Mechanics · Physics 2007-05-23 Qiuping A. Wang

We use a well known model (T. Vicsek et al. Phys Rev Lett 15, 1226 (1995)) for flocking to test mutual information as a tool for detecting order-disorder transitions, in particular when observations of the system are limited. We show that…

Data Analysis, Statistics and Probability · Physics 2009-11-13 R. T. Wicks , S. C. Chapman , R. O. Dendy

Complex systems are often characterized by the interplay of multiple interconnected dynamical processes operating across a range of temporal scales. This phenomenon is widespread in both biological and artificial scenarios, making it…

Statistical Mechanics · Physics 2025-09-08 Giorgio Nicoletti , Daniel M. Busiello

The coordinated and efficient distribution of limited resources by individual decisions is a fundamental, unsolved problem. When individuals compete for road capacities, time, space, money, goods, etc., they normally make decisions based on…

Statistical Mechanics · Physics 2009-11-07 Dirk Helbing , Martin Schoenhof , Daniel Kern

On the one hand, the dissipated heat of a thermodynamic work extraction process upper bounds the non-predictive information, which the associated system encodes about its environment. Thus, emergent information processing capabilities can…

Neurons and Cognition · Quantitative Biology 2020-09-10 Kai Ueltzhöffer

We introduce \emph{informational punishment} to the design of mechanisms that compete with an exogenous status quo mechanism: Players can send garbled public messages with some delay, and others cannot commit to ignoring them. Optimal…

Theoretical Economics · Economics 2023-04-04 Benjamin Balzer , Johannes Schneider

Low-dimensional representations of underdamped systems often provide insightful grasps and analytical tractability. Here, we build such representations via information projections, obtaining an optimal model that captures the most…

Statistical Mechanics · Physics 2022-08-10 Giorgio Nicoletti , Amos Maritan , Daniel M. Busiello
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