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In many biological systems, the movement of individual agents is commonly characterized as having multiple qualitatively distinct behaviors that arise from various biophysical states. This is true for vesicles in intracellular transport,…

Subcellular Processes · Quantitative Biology 2022-07-25 Maria-Veronica Ciocanel , John Fricks , Peter R. Kramer , Scott A. McKinley

We study the stationary state of a chain of harmonic oscillators driven by two active reservoirs at the two ends. These reservoirs exert correlated stochastic forces on the boundary oscillators which eventually leads to a nonequilibrium…

Statistical Mechanics · Physics 2023-01-19 Ritwick Sarkar , Ion Santra , Urna Basu

Diffusive transport in many complex systems features a crossover between anomalous diffusion at short times and normal diffusion at long times. This behavior can be mathematically modeled by cutting off (tempering) beyond a mesoscopic…

Statistical Mechanics · Physics 2021-10-15 Thomas Vojta , Zachary Miller , Samuel Halladay

In theoretical ecology, models describing the spatial dispersal and the temporal evolution of species having non-overlapping generations are often based on integrodifference equations. For various such applications the environment has an…

Dynamical Systems · Mathematics 2022-05-12 Huy Huy , Peter E. Kloeden , Christian Pötzsche

The emergent dynamics in phase-separated mixtures of isometric active and passive Brownian particles is studied numerically in two dimensions. A novel steady-state of well-defined traveling fronts is observed, where the interface between…

Soft Condensed Matter · Physics 2024-06-03 Adam Wysocki , Roland G. Winkler , Gerhard Gompper

We investigate the long term behavior in terms of finite dimensional global and exponential attractors, as time goes to infinity, of solutions to a semilinear reaction-diffusion equation on non-smooth domains subject to nonlocal Robin…

Dynamical Systems · Mathematics 2016-07-20 Ciprian G. Gal , Mahamadi Warma

Rayleigh-Taylor (RT) instability commonly arises in compressible systems with time-dependent acceleration in practical applications. To capture the complex dynamics of such systems, a two-component discrete Boltzmann method is developed to…

Fluid Dynamics · Physics 2025-04-08 Huilin Lai , Chuandong Lin , Hao Xu , Hailong Liu , Demei Li , Bailing Chen

We compare the fluctuations in the velocity and in the fraction of time spent at a given position for minimal models of a passive and an active particle: an asymmetric random walker and a run-and-tumble particle in continuous time and on a…

Statistical Mechanics · Physics 2019-10-03 Emil Mallmin , Richard A Blythe , Martin R Evans

We study the dynamics of a one-dimensional run and tumble particle subjected to confining potentials of the type $V(x) = \alpha \, |x|^p$, with $p>0$. The noise that drives the particle dynamics is telegraphic and alternates between $\pm 1$…

Statistical Mechanics · Physics 2022-06-22 Abhishek Dhar , Anupam Kundu , Satya N. Majumdar , Sanjib Sabhapandit , Grégory Schehr

We consider a particle transport process in a one-dimensional system with a thin membrane, described by a normal diffusion equation. We consider two boundary conditions at the membrane that are linear combinations of integral operators,…

Statistical Mechanics · Physics 2022-05-24 Tadeusz Kosztołowicz , Aldona Dutkiewicz

Random matrix theory (RMT) provides a successful model for quantum systems, whose classical counterpart has a chaotic dynamics. It is based on two assumptions: (1) matrix-element independence, and (2) base invariance. Last decade witnessed…

Chaotic Dynamics · Physics 2011-09-27 A. Y. Abul-Magd

Individual components such as cells, particles, or agents within a larger system often require detailed understanding of their relative position to act accordingly, enabling the system as a whole to function in an organised and efficient…

Statistical Mechanics · Physics 2025-02-28 Jonas Berx , Prashant Singh , Karel Proesmans

Subaqueous and aeolian bedforms are ubiquitous on Earth and other planetary environments. However, it is still unclear which hydrodynamical mechanisms lead to the observed variety of morphologies of self-organized natural patterns such as…

Large-eddy simulations of a flat-plate boundary layer, without a leading edge, subject to multiple levels of incoming free stream turbulence are considered in the present work. Within an input-output model where non-linear terms of the…

Fluid Dynamics · Physics 2024-02-19 Diego C. P. Blanco , Ardeshir Hanifi , Dan S. Henningson , André V. G. Cavalieri

We study the stationary states of an active Brownian particle (ABP) and run-and-tumble particle (RTP) in two dimensional power-law potentials, in the limit where translational diffusion is negligible. The potential energy of the particle…

Soft Condensed Matter · Physics 2025-10-21 Abhik Samui , Manoj Gopalakrishnan

This paper studies the boundary behaviour at mechanical equilibrium at the ends of a finite interval of a class of systems of interacting particles with monotone decreasing repulsive force. Our setting covers pile-ups of dislocations,…

Analysis of PDEs · Mathematics 2016-09-13 Cameron Hall , Thomas Hudson , Patrick van Meurs

Systems switching between different dynamical phases is an ubiquitous phenomenon. The general understanding of such a process is limited. To this end, we present a general expression that captures fluctuations of a system exhibiting a…

Statistical Mechanics · Physics 2024-12-05 Ion Santra , Kristian Stølevik Olsen , Deepak Gupta

We introduce and analyze the physics of "driving reversal" experiments. These are prototype wavepacket dynamics scenarios probing quantum irreversibility. Unlike the mostly hypothetical "time reversal" concept, a "driving reversal" scenario…

Mesoscale and Nanoscale Physics · Physics 2009-11-11 M. Hiller , D. Cohen , T. Geisel , T. Kottos

We give a thermodynamically consistent description of simultaneous heat and particle transport, as well as of the associated cross-effects, in the framework of a chaotic dynamical system, a generalized multibaker map. Besides the density, a…

chao-dyn · Physics 2009-10-31 Laszlo Matyas , Tamas Tel , Jurgen Vollmer

We propose a time-domain boundary integral method to model linear wave propagation with refractive, focusing, and Doppler effects arising from medium heterogeneities and moving obstacles. In contrast to existing techniques, our method…

Numerical Analysis · Mathematics 2026-05-13 Raaghav Ramani