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Many applications in pattern recognition represent patterns as a geometric graph. The geometric graph distance (GGD) has recently been studied as a meaningful measure of similarity between two geometric graphs. Since computing the GGD is…

Computational Geometry · Computer Science 2023-06-12 Sushovan Majhi

We investigate the problem of efficiently computing optimal transport (OT) distances, which is equivalent to the node-capacitated minimum cost maximum flow problem in a bipartite graph. We compare runtimes in computing OT distances on data…

Data Structures and Algorithms · Computer Science 2020-07-07 Yihe Dong , Yu Gao , Richard Peng , Ilya Razenshteyn , Saurabh Sawlani

We present path2vec, a new approach for learning graph embeddings that relies on structural measures of pairwise node similarities. The model learns representations for nodes in a dense space that approximate a given user-defined graph…

Computation and Language · Computer Science 2019-04-15 Andrey Kutuzov , Mohammad Dorgham , Oleksiy Oliynyk , Chris Biemann , Alexander Panchenko

Recent papers have formulated the problem of learning graphs from data as an inverse covariance estimation with graph Laplacian constraints. While such problems are convex, existing methods cannot guarantee that solutions will have specific…

Machine Learning · Statistics 2018-05-09 Eduardo Pavez , Hilmi E. Egilmez , Antonio Ortega

Graph neural network training is mainly categorized into mini-batch and full-batch training methods. The mini-batch training method samples subgraphs from the original graph in each iteration. This sampling operation introduces extra…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-08-02 Shuai Zhang , Zite Jiang , Haihang You

Graph representation learning (GRL) is a fundamental task in machine learning, aiming to encode high-dimensional graph-structured data into low-dimensional vectors. Self-supervised learning (SSL) methods are widely used in GRL because they…

Machine Learning · Computer Science 2024-11-12 Shifeng Xie , Jhony H. Giraldo

Graph generation is a crucial task in many fields, including network science and bioinformatics, as it enables the creation of synthetic graphs that mimic the properties of real-world networks for various applications. Graph Generative…

Machine Learning · Computer Science 2026-01-21 Salvatore Romano , Marco Grassia , Giuseppe Mangioni

A split graph is a graph whose vertex set can be partitioned into a clique and a stable set. Given a graph $G$ and weight function $w: V(G) \to \mathbb{Q}_{\geq 0}$, the Split Vertex Deletion (SVD) problem asks to find a minimum weight set…

Combinatorics · Mathematics 2020-09-24 Matthew Drescher , Samuel Fiorini , Tony Huynh

Persistence diagrams (PD)s play a central role in topological data analysis. This analysis requires computing distances among such diagrams such as the $1$-Wasserstein distance. Accurate computation of these PD distances for large data sets…

Computational Geometry · Computer Science 2025-05-13 Tamal K. Dey , Simon Zhang

Given a graph $G=(V,E)$, a set $S\subseteq V$ is said to be a monitoring edge-geodetic set if the deletion of any edge in the graph results in a change in the distance between at least one pair of vertices in $S$. The minimum size of such a…

Combinatorics · Mathematics 2025-03-11 Florent Foucaud , Arti Pandey , Kaustav Paul

This report evaluates the efficiency of Graph Edit Distance (GED) computation for graph similarity search, comparing Cascading Metric Trees (CMT) with brute-force verification. Despite the anticipated advantages of CMT, our findings…

Databases · Computer Science 2024-05-29 Wenqi Marshall Guo , Jeffrey Uhlmann

Despite the recent success of Graph Neural Networks, it remains challenging to train a GNN on large graphs with millions of nodes and billions of edges, which are prevalent in many graph-based applications. Traditional sampling-based…

Machine Learning · Computer Science 2022-10-04 Zheng Chai , Guangji Bai , Liang Zhao , Yue Cheng

For two multisets $S$ and $T$ of points in $[\Delta]^2$, such that $|S| = |T|= n$, the earth-mover distance (EMD) between $S$ and $T$ is the minimum cost of a perfect bipartite matching with edges between points in $S$ and $T$, i.e.,…

Data Structures and Algorithms · Computer Science 2014-04-28 Arman Yousefi , Rafail Ostrovsky

Optimal transport on a graph focuses on finding the most efficient way to transfer resources from one distribution to another while considering the graph's structure. This paper introduces a new distributed algorithm that solves the optimal…

Optimization and Control · Mathematics 2025-07-08 Yacine Mokhtari , Emmanuel Moulay , Patrick Coirault , Jérôme Le Ny

With the ubiquitous graph-structured data in various applications, models that can learn compact but expressive vector representations of nodes have become highly desirable. Recently, bearing the message passing paradigm, graph neural…

Social and Information Networks · Computer Science 2021-04-13 Tong Chen , Hongzhi Yin , Jie Ren , Zi Huang , Xiangliang Zhang , Hao Wang

Graph embeddings have emerged as a powerful tool for representing complex network structures in a low-dimensional space, enabling the use of efficient methods that employ the metric structure in the embedding space as a proxy for the…

Social and Information Networks · Computer Science 2024-04-18 Radosław Nowak , Adam Małkowski , Daniel Cieślak , Piotr Sokół , Paweł Wawrzyński

Graph contrastive learning (GCL) alleviates the heavy reliance on label information for graph representation learning (GRL) via self-supervised learning schemes. The core idea is to learn by maximising mutual information for similar…

Machine Learning · Computer Science 2022-10-18 Yizhen Zheng , Shirui Pan , Vincent Cs Lee , Yu Zheng , Philip S. Yu

The algorithmic differentiation (AD) of mathematical functions can be interpreted as a sequence of vertex eliminations in an underlying directed acyclic graph. The problem of determining a minimum-cost elimination ordering, which we call…

Data Structures and Algorithms · Computer Science 2026-05-26 Alex Crane , Pål Grønås Drange , Eli Friedman , Paul D. Hovland , Jan Hückelheim , Andrew Lyons , Yosuke Mizutani , Macéo Ottavy , Blair D. Sullivan

Graph Convolutional Networks (GCNs) have emerged as the state-of-the-art graph learning model. However, it can be notoriously challenging to inference GCNs over large graph datasets, limiting their application to large real-world graphs and…

Hardware Architecture · Computer Science 2025-03-11 Haoran You , Tong Geng , Yongan Zhang , Ang Li , Yingyan Celine Lin

This paper deals with the problem of finding a collection of vertex-disjoint paths in a given graph G=(V,E) such that each path has at least four vertices and the total number of vertices in these paths is maximized. The problem is NP-hard…

Data Structures and Algorithms · Computer Science 2023-04-26 Mingyang Gong , Zhi-Zhong Chen , Guohui Lin , Zhaohui Zhan
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