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The decoder-only Transformer architecture with causal masking and relative position encoding (RPE) has become the de facto choice in language modeling. Despite its exceptional performance across various tasks, we have identified two…

Computation and Language · Computer Science 2024-02-08 Qingyu Yin , Xuzheng He , Xiang Zhuang , Yu Zhao , Jianhua Yao , Xiaoyu Shen , Qiang Zhang

Low-count positron emission tomography (PET) reconstruction is a challenging inverse problem due to severe degradations arising from Poisson noise, photon scarcity, and attenuation correction errors. Existing deep learning methods typically…

Image and Video Processing · Electrical Eng. & Systems 2026-04-09 Zheng Zhang , Hao Tang , Yingying Hu , Zhanli Hu , Jing Qin

Recent studies have demonstrated the effectiveness of position encoding in transformer architectures. By incorporating positional information, this approach provides essential guidance for modeling dependencies between elements across…

Machine Learning · Computer Science 2025-08-27 Avinash Amballa

Built upon the Transformer, large language models (LLMs) have captured worldwide attention due to their remarkable abilities. Nevertheless, all Transformer-based models including LLMs suffer from a preset length limit and can hardly…

Computation and Language · Computer Science 2024-10-08 Liang Zhao , Xiachong Feng , Xiaocheng Feng , Weihong Zhong , Dongliang Xu , Qing Yang , Hongtao Liu , Bing Qin , Ting Liu

Large language models (LLMs) increasingly operate in settings that require reliable long-context understanding, such as retrieval-augmented generation and multi-document reasoning. A common strategy is to fine-tune pretrained short-context…

Computation and Language · Computer Science 2026-04-17 Zichong Li , Chen Liang , Liliang Ren , Tuo Zhao , Yelong Shen , Weizhu Chen

Position encoding (PE), an essential part of self-attention networks (SANs), is used to preserve the word order information for natural language processing tasks, generating fixed position indices for input sequences. However, in…

Computation and Language · Computer Science 2020-11-24 Liang Ding , Longyue Wang , Dacheng Tao

Diffusion Transformers (DiTs) have revolutionized high-fidelity video generation, yet their $\mathcal{O}(L^2)$ attention complexity poses a formidable bottleneck for long-sequence synthesis. While recent sparse-linear attention hybrids aim…

Computer Vision and Pattern Recognition · Computer Science 2026-05-21 Yuxi Liu , Zekun Zhang , Yixiang Cai , Renjia Deng , Yutong He , Kun Yuan

Transformer-based language models rely on positional encoding (PE) to handle token order and support context length extrapolation. However, existing PE methods lack theoretical clarity and rely on limited evaluation metrics to substantiate…

Computation and Language · Computer Science 2026-05-11 Arthur S. Bianchessi , Yasmin C. Aguirre , Rodrigo C. Barros , Lucas S. Kupssinskü

We propose Mixed-Panels-Transformer Encoder (MPTE), a novel framework for estimating factor models in panel datasets with mixed frequencies and nonlinear signals. Traditional factor models rely on linear signal extraction and require…

Econometrics · Economics 2026-01-26 Alessio Brini , Ekaterina Seregina

Parameter-efficient fine-tuning (PEFT) of powerful pre-trained models for complex downstream tasks has proven effective in vision and language processing, yet this paradigm remains unexplored in scientific machine learning, where the…

Machine Learning · Computer Science 2025-10-20 Hangwei Zhang , Chun Kang , Yan Wang , Difan Zou

Recent advances in large language models (LLMs) have enhanced their ability to process long input contexts. This development is particularly crucial for tasks that involve retrieving knowledge from an external datastore, which can result in…

Computation and Language · Computer Science 2024-04-03 Zheng Zhang , Fan Yang , Ziyan Jiang , Zheng Chen , Zhengyang Zhao , Chengyuan Ma , Liang Zhao , Yang Liu

We present Position Interpolation (PI) that extends the context window sizes of RoPE-based pretrained LLMs such as LLaMA models to up to 32768 with minimal fine-tuning (within 1000 steps), while demonstrating strong empirical results on…

Computation and Language · Computer Science 2023-06-29 Shouyuan Chen , Sherman Wong , Liangjian Chen , Yuandong Tian

The attention mechanism is a fundamental component of the Transformer model, contributing to interactions among distinct tokens, in contrast to earlier feed-forward neural networks. In general, the attention scores are determined simply by…

Computation and Language · Computer Science 2024-10-11 Chuanyang Zheng , Yihang Gao , Han Shi , Jing Xiong , Jiankai Sun , Jingyao Li , Minbin Huang , Xiaozhe Ren , Michael Ng , Xin Jiang , Zhenguo Li , Yu Li

Position embeddings, encoding the positional relationships among tokens in text sequences, make great contributions to modeling local context features in Transformer-based pre-trained language models. However, in Extractive Question…

Computation and Language · Computer Science 2023-11-21 Mingxu Tao , Yansong Feng , Dongyan Zhao

Inspired by the Bloch Sphere representation, we propose a novel rotary position encoding on a three-dimensional sphere, named 3D Rotary Position Encoding (3D-RPE). 3D-RPE is an advanced version of the widely used 2D Rotary Position Encoding…

Computation and Language · Computer Science 2024-06-17 Xindian Ma , Wenyuan Liu , Peng Zhang , Nan Xu

Recent studies have revealed various manifestations of position bias in transformer architectures, from the "lost-in-the-middle" phenomenon to attention sinks, yet a comprehensive theoretical understanding of how attention masks and…

Machine Learning · Computer Science 2025-08-12 Xinyi Wu , Yifei Wang , Stefanie Jegelka , Ali Jadbabaie

Recently, Large language models (LLMs) have revolutionized Natural Language Processing (NLP). Pretrained LLMs, due to limited training context size, struggle with handling long token sequences, limiting their performance on various…

Computation and Language · Computer Science 2024-12-11 Haoran Lian , Junmin Chen , Wei Huang , Yizhe Xiong , Wenping Hu , Guiguang Ding , Hui Chen , Jianwei Niu , Zijia Lin , Fuzheng Zhang , Di Zhang

Many studies have revealed that large language models (LLMs) exhibit uneven awareness of different contextual positions. Their limited context awareness can lead to overlooking critical information and subsequent task failures. While…

Computation and Language · Computer Science 2024-10-18 Hongzhan Lin , Ang Lv , Yuhan Chen , Chen Zhu , Yang Song , Hengshu Zhu , Rui Yan

Fourier features based positional encoding (PE) is commonly used in machine learning tasks that involve learning high-frequency features from low-dimensional inputs, such as 3D view synthesis and time series regression with neural tangent…

Machine Learning · Computer Science 2024-07-18 Chuanhao Sun , Zhihang Yuan , Kai Xu , Luo Mai , N. Siddharth , Shuo Chen , Mahesh K. Marina

It is well noted that coordinate based MLPs benefit -- in terms of preserving high-frequency information -- through the encoding of coordinate positions as an array of Fourier features. Hitherto, the rationale for the effectiveness of these…

Machine Learning · Computer Science 2021-10-13 Jianqiao Zheng , Sameera Ramasinghe , Simon Lucey